H19 potentiates let-7 family expression through reducing PTBP1 binding to their precursors in cholestasis.

作者: Li Zhang , Zhihong Yang , Wendong Huang , Jianguo Wu

DOI: 10.1038/S41419-019-1423-6

关键词: Messenger RNAMolecular biologyCholestasisBile acidPTBP1microRNARNAChemistryCholangiocyteDownregulation and upregulation

摘要: Cholestasis induces the hepatic long non-coding RNA H19, which promotes progression of cholestatic liver fibrosis. However, microRNAs that are dysregulated by H19 during cholestasis remain elusive. Using miRNA-sequencing analysis followed qPCR validation, we identified marked upregulation eight members let-7 family in livers bile duct ligation (BDL) and overexpression. In particular, expression let-7a-1/7d/7f-1 was highly induced H19-BDL but decreased H19KO-BDL livers. Interestingly, nuclear precursors as well primary transcripts levels BDL mouse Bioinformatics, pull-down, immunoprecipitation (RIP) assays revealed crucial RNA-binding protein polypyrimidine tract-binding 1 (PTBP1), an interaction partner, interacted with let-7a-1 let-7d suppressed their maturation. Both PTBP1 differentially regulated different acid species hepatocyte cholangiocyte cells. Further, negatively PTBP1’s mRNA did not affect its subcellular distribution Moreover, found restrained facilitated bioavailability miRNAs to targets. Taken together, this study for first time promoted decreasing level binding cholestasis.

参考文章(56)
Leon N Schulte, Ana Eulalio, Hans-Joachim Mollenkopf, Richard Reinhardt, Jörg Vogel, Analysis of the host microRNA response to Salmonella uncovers the control of major cytokines by the let-7 family The EMBO Journal. ,vol. 30, pp. 1977- 1989 ,(2011) , 10.1038/EMBOJ.2011.94
Hosuk Lee, Sungwook Han, Chang Seob Kwon, Daeyoup Lee, Biogenesis and regulation of the let-7 miRNAs and their functional implications Protein & Cell. ,vol. 7, pp. 100- 113 ,(2016) , 10.1007/S13238-015-0212-Y
Bart Engels, Guillaume Jannot, Judit Remenyi, Martin J. Simard, György Hutvagner, Polypyrimidine Tract Binding Protein (hnRNP I) Is Possibly a Conserved Modulator of miRNA-Mediated Gene Regulation PLoS ONE. ,vol. 7, pp. e33144- ,(2012) , 10.1371/JOURNAL.PONE.0033144
Luca Quagliata, Luigi M. Terracciano, Liver Diseases and Long Non-Coding RNAs: New Insight and Perspective. Frontiers of Medicine in China. ,vol. 1, pp. 35- 35 ,(2014) , 10.3389/FMED.2014.00035
Kirsty Sawicka, Martin Bushell, Keith A. Spriggs, Anne E. Willis, Polypyrimidine-tract-binding protein: a multifunctional RNA-binding protein Biochemical Society Transactions. ,vol. 36, pp. 641- 647 ,(2008) , 10.1042/BST0360641
Steven O'Hara, Tetyana Masyuk, Maria Pisarello, Nicholas LaRusso, Sergio Gradilone, MicroRNAs and benign biliary tract diseases. Seminars in Liver Disease. ,vol. 35, pp. 26- 35 ,(2015) , 10.1055/S-0034-1397346
Amanda N. Kallen, Xiao-Bo Zhou, Jie Xu, Chong Qiao, Jing Ma, Lei Yan, Lingeng Lu, Chaochun Liu, Jae-Sung Yi, Haifeng Zhang, Wang Min, Anton M. Bennett, Richard I. Gregory, Ye Ding, Yingqun Huang, The imprinted H19 lncRNA antagonizes let-7 microRNAs. Molecular Cell. ,vol. 52, pp. 101- 112 ,(2013) , 10.1016/J.MOLCEL.2013.08.027
Yuan Gao, Fuju Wu, Jichun Zhou, Lei Yan, Michael J. Jurczak, Hui-Young Lee, Lihua Yang, Martin Mueller, Xiao-Bo Zhou, Luisa Dandolo, Julia Szendroedi, Michael Roden, Clare Flannery, Hugh Taylor, Gordon G. Carmichael, Gerald I. Shulman, Yingqun Huang, The H19/let-7 double-negative feedback loop contributes to glucose metabolism in muscle cells Nucleic Acids Research. ,vol. 42, pp. 13799- 13811 ,(2014) , 10.1093/NAR/GKU1160
Kerstien A. Padgett, Ruth Y. Lan, Patrick C. Leung, Ana Lleo, Kevin Dawson, Janice Pfeiff, Tin K. Mao, Ross L. Coppel, Aftab A. Ansari, M. Eric Gershwin, Primary biliary cirrhosis is associated with altered hepatic microRNA expression. Journal of Autoimmunity. ,vol. 32, pp. 246- 253 ,(2009) , 10.1016/J.JAUT.2009.02.022
Michael R. DeBaun, Emily L. Niemitz, D. Elizabeth McNeil, Sheri A. Brandenburg, Maxwell P. Lee, Andrew P. Feinberg, Epigenetic alterations of H19 and LIT1 distinguish patients with Beckwith-Wiedemann syndrome with cancer and birth defects. American Journal of Human Genetics. ,vol. 70, pp. 604- 611 ,(2002) , 10.1086/338934