Drift estimation for single marker switching based imaging schemes

作者: Claudia Geisler , Thomas Hotz , Andreas Schönle , Stefan W. Hell , Axel Munk

DOI: 10.1364/OE.20.007274

关键词:

摘要: In recent years, the diffraction barrier in fluorescence imaging has been broken and optical nanoscopes now routinely image with resolutions of down to 20 nm, an improvement more than 10 fold. Because this allows much smaller features because all super-resolution approaches trade off speed for spatial resolution, mechanical instabilities microscopes become a limiting factor. Here, we propose fully data-driven statistical registration method drift detection correction single marker switching (SMS) schemes, including guideline parameter choice quality checks analysis. The necessary assumptions about are minimal, allowing model-free approach, but specific models can easily be integrated. We determine resulting performance on standard SMS measurements show that determination brought range precision achievable by fiducial marker-tracking methods.

参考文章(33)
Lisa Gottesfeld Brown, A survey of image registration techniques ACM Computing Surveys. ,vol. 24, pp. 325- 376 ,(1992) , 10.1145/146370.146374
Na Ji, Hari Shroff, Haining Zhong, Eric Betzig, Advances in the speed and resolution of light microscopy. Current Opinion in Neurobiology. ,vol. 18, pp. 605- 616 ,(2008) , 10.1016/J.CONB.2009.03.009
M. Bates, B. Huang, G. T. Dempsey, X. Zhuang, Multicolor Super-Resolution Imaging with Photo-Switchable Fluorescent Probes Science. ,vol. 317, pp. 1749- 1753 ,(2007) , 10.1126/SCIENCE.1146598
Manuel F Juette, Travis J Gould, Mark D Lessard, Michael J Mlodzianoski, Bhupendra S Nagpure, Brian T Bennett, Samuel T Hess, Joerg Bewersdorf, Three-dimensional sub–100 nm resolution fluorescence microscopy of thick samples Nature Methods. ,vol. 5, pp. 527- 529 ,(2008) , 10.1038/NMETH.1211
H. Shroff, C. G. Galbraith, J. A. Galbraith, H. White, J. Gillette, S. Olenych, M. W. Davidson, E. Betzig, Dual-color superresolution imaging of genetically expressed probes within individual adhesion complexes Proceedings of the National Academy of Sciences of the United States of America. ,vol. 104, pp. 20308- 20313 ,(2007) , 10.1073/PNAS.0710517105
G. Shtengel, J. A. Galbraith, C. G. Galbraith, J. Lippincott-Schwartz, J. M. Gillette, S. Manley, R. Sougrat, C. M. Waterman, P. Kanchanawong, M. W. Davidson, R. D. Fetter, H. F. Hess, Interferometric fluorescent super-resolution microscopy resolves 3D cellular ultrastructure Proceedings of the National Academy of Sciences of the United States of America. ,vol. 106, pp. 3125- 3130 ,(2009) , 10.1073/PNAS.0813131106
Michael J Rust, Mark Bates, Xiaowei Zhuang, Sub-diffraction-limit imaging by stochastic optical reconstruction microscopy (STORM) Nature Methods. ,vol. 3, pp. 793- 796 ,(2006) , 10.1038/NMETH929
Travis J Gould, Vladislav V Verkhusha, Samuel T Hess, Imaging biological structures with fluorescence photoactivation localization microscopy Nature Protocols. ,vol. 4, pp. 291- 308 ,(2009) , 10.1038/NPROT.2008.246
Michael J. Mlodzianoski, John M. Schreiner, Steven P. Callahan, Katarina Smolková, Andrea Dlasková, Jitka Šantorová, Petr Ježek, Joerg Bewersdorf, Sample drift correction in 3D fluorescence photoactivation localization microscopy Optics Express. ,vol. 19, pp. 15009- 15019 ,(2011) , 10.1364/OE.19.015009
Alexandros Pertsinidis, Yunxiang Zhang, Steven Chu, Subnanometre single-molecule localization, registration and distance measurements Nature. ,vol. 466, pp. 647- 651 ,(2010) , 10.1038/NATURE09163