Genomic scans for selective sweeps using SNP data
作者： Rasmus Nielsen , Scott Williamson , Yuseob Kim , Melissa J Hubisz , Andrew G Clark
DOI: 10.1101/GR.4252305
关键词:
摘要: … tests aimed at detecting selective sweeps from genomic SNP … high power to detect selective sweeps and is surprisingly robust … estimates of the location of the selective sweep(s) and the …
genome.org参考文章(35)
L L Cavalli-Sforza, Analytic review: some current problems of human population genetics. American Journal of Human Genetics. ,vol. 25, pp. 82- 104 ,(1973)
C H Langley, R R Hudson, N L Kaplan, The "hitchhiking effect" revisited. Genetics. ,vol. 123, pp. 887- 899 ,(1989) , 10.1093/GENETICS/123.4.887
Molly Przeworski, Estimating the time since the fixation of a beneficial allele. Genetics. ,vol. 164, pp. 1667- 1676 ,(2003) , 10.1093/GENETICS/164.4.1667
Rasmus Nielsen, Melissa J. Hubisz, Andrew G. Clark, Reconstituting the Frequency Spectrum of Ascertained Single-Nucleotide Polymorphism Data Genetics. ,vol. 168, pp. 2373- 2382 ,(2004) , 10.1534/GENETICS.104.031039
Joshua M Akey, Ge Zhang, Kun Zhang, Li Jin, Mark D Shriver, Interrogating a High-Density SNP Map for Signatures of Natural Selection Genome Research. ,vol. 12, pp. 1805- 1814 ,(2002) , 10.1101/GR.631202
Wolfgang Stephan, Thomas H.E. Wiehe, Marcus W. Lenz, The effect of strongly selected substitutions on neutral polymorphism: Analytical results based on diffusion theory Theoretical Population Biology. ,vol. 41, pp. 237- 254 ,(1992) , 10.1016/0040-5809(92)90045-U
Richard Durrett, Jason Schweinsberg, Approximating selective sweeps. Theoretical Population Biology. ,vol. 66, pp. 129- 138 ,(2004) , 10.1016/J.TPB.2004.04.002
Jeffrey D. Jensen, Yuseob Kim, Vanessa Bauer DuMont, Charles F. Aquadro, Carlos D. Bustamante, Distinguishing Between Selective Sweeps and Demography Using DNA Polymorphism Data Genetics. ,vol. 170, pp. 1401- 1410 ,(2005) , 10.1534/GENETICS.104.038224
Pardis C. Sabeti, David E. Reich, John M. Higgins, Haninah Z. P. Levine, Daniel J. Richter, Stephen F. Schaffner, Stacey B. Gabriel, Jill V. Platko, Nick J. Patterson, Gavin J. McDonald, Hans C. Ackerman, Sarah J. Campbell, David Altshuler, Richard Cooper, Dominic Kwiatkowski, Ryk Ward, Eric S. Lander, Detecting recent positive selection in the human genome from haplotype structure Nature. ,vol. 419, pp. 832- 837 ,(2002) , 10.1038/NATURE01140
TIH Project, None, The International HapMap Project Nature. ,vol. 426, pp. 789- 796 ,(2003) , 10.1038/NATURE02168