Automated Process of Q-PCR/Gene Expression

作者: James M Cherry , Claudia Stewart , Casey Frankenberger , Kelly Martin , Gabriela Tudor

DOI: 10.1016/J.JALA.2004.04.011

关键词:

摘要: PCR-based fluorescent detection assays for the relative and quantitative measurement of gene expression, such as Taq Man™, LUX™, SYBR Green™, are currently in wide spread use due to their general applicability, low cost, reproducibility, accuracy, ease use. One current limitation PCR (Q-PCR) is lack a fully integrated high-throughput method genomic diagnostic applications. Here we report reliable system automated extraction RNA, first-strand cDNA synthesis, quality control measures, consecutive real-time amplification, primary data analysis. As described, this procedure utilizes commonly available reagents pre-packaged “kits” RNA extraction, first strand Q-PCR, liquid handling, capillary electrophoresis that generally applicable variety robotic platforms. (JALA 2004;9:128-34)

参考文章(6)
Julia Khandurina, Hur-Song Chang, Bart Wanders, András Guttman, Automated high-throughput RNA analysis by capillary electrophoresis BioTechniques. ,vol. 32, pp. 1226- 1230 ,(2002) , 10.2144/02326BM02
Melanie L. Richard, Roger H. Frappier, Jonathan C. Newman, Developmental validation of a real-time quantitative PCR assay for automated quantification of human DNA. Journal of Forensic Sciences. ,vol. 48, pp. 1041- 1046 ,(2003) , 10.1520/JFS2002440
Shannon L. Emery, Dean D. Erdman, Michael D. Bowen, Bruce R. Newton, Jonas M. Winchell, Richard F. Meyer, Suxiang Tong, Byron T. Cook, Brian P. Holloway, Karen A. McCaustland, Paul A. Rota, Bettina Bankamp, Luis E. Lowe, Tom G. Ksiazek, William J. Bellini, Larry J. Anderson, Real-time reverse transcription-polymerase chain reaction assay for SARS-associated coronavirus. Emerging Infectious Diseases. ,vol. 10, pp. 311- 316 ,(2004) , 10.3201/EID1002.030759
Detlef Boehm, Sabine Herold, Alma Kuechler, Thomas Liehr, Franco Laccone, Rapid detection of subtelomeric deletion/duplication by novel real-time quantitative PCR using SYBR-green dye Human Mutation. ,vol. 23, pp. 368- 378 ,(2004) , 10.1002/HUMU.20011
C Stewart, High Throughput Primer Walking of cDNA Clones Journal of Laboratory Automation. ,vol. 8, pp. 64- 65 ,(2003) , 10.1016/S1535-5535(04)00256-4
V. Leb, M. Stocher, E. Valentine-Thon, G. Holzl, H. Kessler, H. Stekel, J. Berg, Fully Automated, Internally Controlled Quantification of Hepatitis B Virus DNA by Real-Time PCR by Use of the MagNA Pure LC and LightCycler Instruments Journal of Clinical Microbiology. ,vol. 42, pp. 585- 590 ,(2004) , 10.1128/JCM.42.2.585-590.2004