Faithful inheritance of cytosine methylation patterns in repeated sequences of the allotetraploid tobacco correlates with the expression of DNA methyltransferase gene families from both parental genomes.

作者: Jaroslav Fulneček , Roman Matyášek , Aleš Kovařík

DOI: 10.1007/S00438-008-0420-8

关键词:

摘要: The widespread occurrence of epigenetic alterations in allopolyploid species deserves scrutiny that DNA methylation systems may be perturbed by interspecies hybridization and polyploidization. Here we studied the genes involved Nicotiana tabacum (tobacco) allotetraploid containing S T genomes inherited from sylvestris tomentosiformis progenitors. To determine inheritance methyltransferase their expression patterns examined three major families (MET1, CMT3 DRM) tobacco progenitor species. Using Southern blot PCR-based methods (genomic CAPS), found parental loci these gene are retained tobacco. Homoeologous was all tissues (leaf, root, flower) suggesting were probably not themselves targets uniparental silencing for over thousands generations evolution. level CG CHG selected high-copy repeated sequences similar high its diploid We speculate natural selection might favor additive maintaining levels tobacco, which has a repeat-rich heterochromatic genome.

参考文章(82)
J. Jakowitsch, I. Papp, M.A. Matzke, A.J.M. Matzke, Identification of a new family of highly repetitive DNA, NTS9, that is located predominantly on the S9 chromosome of tobacco. Chromosome Research. ,vol. 6, pp. 649- 651 ,(1998) , 10.1023/A:1009265713279
P. Meyer, I. Niedenhof, M. ten Lohuis, Evidence for cytosine methylation of non-symmetrical sequences in transgenic Petunia hybrida The EMBO Journal. ,vol. 13, pp. 2084- 2088 ,(1994) , 10.1002/J.1460-2075.1994.TB06483.X
Mark K. Ashby, Andrew Warry, Eduardo R. Bejarano*, Alaa Khashoggi, Michael Burrell, Conrad P. Lichtenstein*, Analysis of multiple copies of geminiviral DNA in the genome of four closely related Nicotiana species suggest a unique integration event. Plant Molecular Biology. ,vol. 35, pp. 313- 321 ,(1997) , 10.1023/A:1005885200550
E.J. Finnegan, K.A. Kovac, Plant DNA methyltransferases. Plant Molecular Biology. ,vol. 43, pp. 189- 201 ,(2000) , 10.1023/A:1006427226972
MARJORI MATZKE, WOLFGANG GREGOR, M. FLORIAN METTE, WERNER AUFSATZ, TATSUO KANNO, JOHANNES JAKOWITSCH, ANTONIUS J. M. MATZKE, Endogenous pararetroviruses of allotetraploid Nicotiana tabacum and its diploid progenitors, N. sylvestris and N. tomentosiformis Biological Journal of The Linnean Society. ,vol. 82, pp. 627- 638 ,(2004) , 10.1111/J.1095-8312.2004.00347.X
H.A. Lütcke, K.C. Chow, F.S. Mickel, K.A. Moss, H.F. Kern, G.A. Scheele, Selection of AUG initiation codons differs in plants and animals. The EMBO Journal. ,vol. 6, pp. 43- 48 ,(1987) , 10.1002/J.1460-2075.1987.TB04716.X
Maud Petit, K. Yoong Lim, Emilie Julio, Charles Poncet, François Dorlhac de Borne, Ales Kovarik, Andrew R. Leitch, Marie-Angèle Grandbastien, Corinne Mhiri, Differential impact of retrotransposon populations on the genome of allotetraploid tobacco (Nicotiana tabacum) Molecular Genetics and Genomics. ,vol. 278, pp. 1- 15 ,(2007) , 10.1007/S00438-007-0226-0
I. Ingelbrecht, H. Van Houdt, M. Van Montagu, A. Depicker, Posttranscriptional silencing of reporter transgenes in tobacco correlates with DNA methylation Proceedings of the National Academy of Sciences of the United States of America. ,vol. 91, pp. 10502- 10506 ,(1994) , 10.1073/PNAS.91.22.10502