Biodiversity of Mineral Nutrient and Trace Element Accumulation in Arabidopsis thaliana

作者: Ivan Baxter , Christian Hermans , Brett Lahner , Elena Yakubova , Marina Tikhonova

DOI: 10.1371/JOURNAL.PONE.0035121

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摘要: In order to grow on soils that vary widely in chemical composition, plants have evolved mechanisms for regulating the elemental composition of their tissues balance mineral nutrient and trace element bioavailability soil with requirements plant growth development. The biodiversity exists within a species can be utilized investigate how regulatory individual elements interact identify genes important these processes. We analyzed (ionome) set 96 wild accessions genetic model Arabidopsis thaliana grown hydroponic culture using inductively coupled plasma mass spectrometry (ICP-MS). concentrations 17–19 were roots leaves from hydroponically, seeds artificial soil. Significant effects detected almost every analyzed. observed very few correlations between either or seeds. There many pairs significantly correlated each other tissue, but none consistently across conditions, phenomenon several previous studies. These results suggest ionome tissue is variable, yet tightly controlled by gene×environment interactions. dataset provides valuable resource mapping studies accumulation. All ionomic data available at www.ionomicshub.org.

参考文章(47)
Ivan Baxter, Prashant S. Hosmani, Ana Rus, Brett Lahner, Justin O. Borevitz, Balasubramaniam Muthukumar, Michael V. Mickelbart, Lukas Schreiber, Rochus B. Franke, David E. Salt, Root Suberin Forms an Extracellular Barrier That Affects Water Relations and Mineral Nutrition in Arabidopsis PLoS Genetics. ,vol. 5, pp. e1000492- ,(2009) , 10.1371/JOURNAL.PGEN.1000492
I. R. Baxter, O. Vitek, B. Lahner, B. Muthukumar, M. Borghi, J. Morrissey, M. L. Guerinot, D. E. Salt, The leaf ionome as a multivariable system to detect a plant's physiological status Proceedings of the National Academy of Sciences of the United States of America. ,vol. 105, pp. 12081- 12086 ,(2008) , 10.1073/PNAS.0804175105
Melinda A. Klein, Michael A. Grusak, Identification of nutrient and physical seed trait QTL in the model legume Lotus japonicus. Genome. ,vol. 52, pp. 677- 691 ,(2009) , 10.1139/G09-039
R. W. Michelmore, I. Paran, R. V. Kesseli, Identification of markers linked to disease-resistance genes by bulked segregant analysis: a rapid method to detect markers in specific genomic regions by using segregating populations. Proceedings of the National Academy of Sciences of the United States of America. ,vol. 88, pp. 9828- 9832 ,(1991) , 10.1073/PNAS.88.21.9828
Timothy P. Durrett, Walter Gassmann, Elizabeth E. Rogers, The FRD3-mediated efflux of citrate into the root vasculature is necessary for efficient iron translocation. Plant Physiology. ,vol. 144, pp. 197- 205 ,(2007) , 10.1104/PP.107.097162
Magnus Nordborg, Tina T Hu, Yoko Ishino, Jinal Jhaveri, Christopher Toomajian, Honggang Zheng, Erica Bakker, Peter Calabrese, Jean Gladstone, Rana Goyal, Mattias Jakobsson, Sung Kim, Yuri Morozov, Badri Padhukasahasram, Vincent Plagnol, Noah A Rosenberg, Chitiksha Shah, Jeffrey D Wall, Jue Wang, Keyan Zhao, Theodore Kalbfleisch, Vincent Schulz, Martin Kreitman, Joy Bergelson, None, The pattern of polymorphism in Arabidopsis thaliana. PLOS Biology. ,vol. 3, pp. 1289- 1299 ,(2005) , 10.1371/JOURNAL.PBIO.0030196
Olivier Loudet, Vera Saliba-Colombani, Christine Camilleri, Fanny Calenge, Virginie Gaudon, Anna Koprivova, Kathryn A North, Stanislav Kopriva, Françoise Daniel-Vedele, Natural variation for sulfate content in Arabidopsis thaliana is highly controlled by APR2. Nature Genetics. ,vol. 39, pp. 896- 900 ,(2007) , 10.1038/NG2050