Uncultivated thermophiles: current status and spotlight on 'Aigarchaeota'.
作者： Brian P Hedlund , Senthil K Murugapiran , Timothy W Alba , Asaf Levy , Jeremy A Dodsworth
DOI: 10.1016/J.MIB.2015.06.008
关键词:
摘要: Meta-analysis of cultivation-independent sequence data shows that geothermal systems host an abundance novel organisms, representing a vast unexplored phylogenetic and functional diversity among yet-uncultivated thermophiles. A number thermophiles have recently been interrogated using metagenomic and/or single-cell genomic approaches, including members taxonomic groups inhabit both thermal non-thermal environments, such as 'Acetothermia' (OP1) 'Atribacteria' (OP9/JS1), well the exclusively thermophilic lineages 'Korarchaeota', 'Calescamantes' (EM19), 'Fervidibacteria' (OctSpA1-106), 'Aigarchaeota' (HWCG-I). The 'Aigarchaeota', sister lineage to Thaumarchaeota, likely includes hyperthermophiles moderate They terrestrial, marine, subsurface environments comprise at least nine genus-level lineages, several which are globally distributed.
core.ac.uk
osti.gov
elsevier.com
sci-hub.se 参考文章(70)
Paulette M. Vignais, Hydrogenases and H(+)-reduction in primary energy conservation. Results and problems in cell differentiation. ,vol. 45, pp. 223- 252 ,(2007) , 10.1007/400_2006_027
Vitaly V Kadnikov, Sergey N Gavrilov, Andrey V Mardanov, Alexander Y Merkel, Olga V Karnachuk, Nikolay V Ravin, Elizaveta A Bonch-Osmolovskaya, Ilya V Kublanov, Olga A Podosokorskaya, None, Characterization of Melioribacter roseus gen. nov., sp. nov., a novel facultatively anaerobic thermophilic cellulolytic bacterium from the class Ignavibacteria, and a proposal of a novel bacterial phylum Ignavibacteriae Environmental Microbiology. ,vol. 15, pp. 1759- 1771 ,(2013) , 10.1111/1462-2920.12067
A L Reysenbach, G S Wickham, N R Pace, Phylogenetic analysis of the hyperthermophilic pink filament community in Octopus Spring, Yellowstone National Park. Applied and Environmental Microbiology. ,vol. 60, pp. 2113- 2119 ,(1994) , 10.1128/AEM.60.6.2113-2119.1994
Iain C. Sutcliffe, Cell envelope architecture in the Chloroflexi: a shifting frontline in a phylogenetic turf war. Environmental Microbiology. ,vol. 13, pp. 279- 282 ,(2011) , 10.1111/J.1462-2920.2010.02339.X
Amaya M. Garcia Costas, Zhenfeng Liu, Lynn P. Tomsho, Stephan C. Schuster, David M. Ward, Donald A. Bryant, Complete genome of Candidatus Chloracidobacterium thermophilum, a chlorophyll‐based photoheterotroph belonging to the phylum Acidobacteria Environmental Microbiology. ,vol. 14, pp. 177- 190 ,(2012) , 10.1111/J.1462-2920.2011.02592.X
S. M. Barns, R. E. Fundyga, M. W. Jeffries, N. R. Pace, Remarkable archaeal diversity detected in a Yellowstone National Park hot spring environment Proceedings of the National Academy of Sciences of the United States of America. ,vol. 91, pp. 1609- 1613 ,(1994) , 10.1073/PNAS.91.5.1609
Rika E. Anderson, Mitchell L. Sogin, John A. Baross, Evolutionary Strategies of Viruses, Bacteria and Archaea in Hydrothermal Vent Ecosystems Revealed through Metagenomics PLoS ONE. ,vol. 9, pp. e109696- ,(2014) , 10.1371/JOURNAL.PONE.0109696
Qiuyuan Huang, Hongchen Jiang, Brandon R. Briggs, Shang Wang, Weiguo Hou, Gaoyuan Li, Geng Wu, Ramonito Solis, Carlo A. Arcilla, Teofilo Abrajano, Hailiang Dong, Archaeal and bacterial diversity in acidic to circumneutral hot springs in the Philippines. FEMS Microbiology Ecology. ,vol. 85, pp. 452- 464 ,(2013) , 10.1111/1574-6941.12134
Trinity L. Hamilton, Evangeline Koonce, Alta Howells, Jeff R. Havig, Talia Jewell, José R. de la Torre, John W. Peters, Eric S. Boyd, Competition for ammonia influences the structure of chemotrophic communities in geothermal springs. Applied and Environmental Microbiology. ,vol. 80, pp. 653- 661 ,(2014) , 10.1128/AEM.02577-13
Kara Bowen De León, Robin Gerlach, Brent M Peyton, Matthew W Fields, None, Archaeal and bacterial communities in three alkaline hot springs in Heart Lake Geyser Basin, Yellowstone National Park Frontiers in Microbiology. ,vol. 4, pp. 330- 330 ,(2013) , 10.3389/FMICB.2013.00330