MicroRNA profiling of the murine hematopoietic system

作者: Silvia Monticelli , K Mark Ansel , Changchun Xiao , Nicholas D Socci , Anna M Krichevsky

DOI: 10.1186/GB-2005-6-8-R71

关键词:

摘要: Background: MicroRNAs (miRNAs) are a class of recently discovered noncoding RNA genes that post-transcriptionally regulate gene expression. It is becoming clear miRNAs play an important role in the regulation expression during development. However, mammals, data principally based on whole tissue analysis and still very incomplete. Results: We used oligonucleotide arrays to analyze miRNA murine hematopoietic system. Complementary oligonucleotides capable hybridizing 181 were immobilized membrane probed with radiolabeled derived from low molecular weight fractions total several different neuronal cells. This method allowed us cell type-specific patterns identify might be for lineage specification and/or effector functions. Conclusion: first report systematic profiling cells As expected, between non-hematopoietic cells, further subtle differences observed within group. Interestingly, most pronounced similarities among fully differentiated (Th1 Th2 lymphocytes mast cells) precursors at comparable stages differentiation (double negative thymocytes pro-B cells), suggesting addition regulating process commitment particular cellular lineages, have general mechanism maintenance identity.

参考文章(38)
Deborah C. Solymar, Suneet Agarwal, Craig H. Bassing, Frederick W. Alt, Anjana Rao, A 3′ Enhancer in the IL-4 Gene Regulates Cytokine Production by Th2 Cells and Mast Cells Immunity. ,vol. 17, pp. 41- 50 ,(2002) , 10.1016/S1074-7613(02)00334-5
K Mark Ansel, Rebecca J Greenwald, Suneet Agarwal, Craig H Bassing, Silvia Monticelli, Jeneen Interlandi, Ivana M Djuretic, Dong U Lee, Arlene H Sharpe, Frederick W Alt, Anjana Rao, Deletion of a conserved Il4 silencer impairs T helper type 1–mediated immunity Nature Immunology. ,vol. 5, pp. 1251- 1259 ,(2004) , 10.1038/NI1135
Lee P. Lim, Nelson C. Lau, Philip Garrett-Engele, Andrew Grimson, Janell M. Schelter, John Castle, David P. Bartel, Peter S. Linsley, Jason M. Johnson, Microarray analysis shows that some microRNAs downregulate large numbers of target mRNAs Nature. ,vol. 433, pp. 769- 773 ,(2005) , 10.1038/NATURE03315
Gunter Meister, Thomas Tuschl, Mechanisms of gene silencing by double-stranded RNA Nature. ,vol. 431, pp. 343- 349 ,(2004) , 10.1038/NATURE02873
Oliver Hobert, Common logic of transcription factor and microRNA action. Trends in Biochemical Sciences. ,vol. 29, pp. 462- 468 ,(2004) , 10.1016/J.TIBS.2004.07.001
Victor Ambros, The functions of animal microRNAs Nature. ,vol. 431, pp. 350- 355 ,(2004) , 10.1038/NATURE02871
Bino John, Anton J Enright, Alexei Aravin, Thomas Tuschl, Chris Sander, Debora S Marks, None, Human MicroRNA targets. PLOS Biology. ,vol. 2, ,(2004) , 10.1371/JOURNAL.PBIO.0020363
Azra Krek, Dominic Grün, Matthew N Poy, Rachel Wolf, Lauren Rosenberg, Eric J Epstein, Philip MacMenamin, Isabelle da Piedade, Kristin C Gunsalus, Markus Stoffel, Nikolaus Rajewsky, Combinatorial microRNA target predictions Nature Genetics. ,vol. 37, pp. 495- 500 ,(2005) , 10.1038/NG1536