Detection and quantification of Prymnesium parvum (Haptophyceae) by real-time PCR.

作者: L. Galluzzi , E. Bertozzini , A. Penna , F. Perini , A. Pigalarga

DOI: 10.1111/J.1472-765X.2007.02294.X

关键词:

摘要: Aims:  The ichthyotoxic species Prymnesium parvum (Haptophyceae) is difficult to quantify in a microscopy-based monitoring programme, because the cells are very small, fragile and their morphology can be distorted by use of fixatives. In attempt overcome these problems, real-time PCR-based method for rapid sensitive identification quantification P. was developed. Methods Results:  A quantitative PCR assay optimized with primers designed on internal transcribed spacer 2 rDNA region parvum. This specific, showing no amplification DNA extracted from closely related species, sensitive. Moreover, this able detect reliably preserved environmental samples artificially spiked known amounts cultured cells. Conclusions:  Considering specificity, sensitivity applicability samples, may useful tool toxic species. Significance Impact Study:  described study represent progress towards detection water-monitoring programmes, allowing early application strategies control bloom events, such as clay minerals.

参考文章(15)
Milton N. Nelson, Hector Macpherson, Preservation and storage Corvallis, Or. : Federal Cooperative Extension Service, Oregon State College. ,(1940)
Antonella Penna, Cristina Ingarao, Manuela Ercolessi, Marco Rocchi, Nunzio Penna, None, Potentially harmful microalgal distribution in an area of the NW Adriatic coastline: Sampling procedure and correlations with environmental factors Estuarine Coastal and Shelf Science. ,vol. 70, pp. 307- 316 ,(2006) , 10.1016/J.ECSS.2006.06.023
Johannes A. Hagström, Edna Granéli, Removal of Prymnesium parvum (Haptophyceae) cells under different nutrient conditions by clay Harmful Algae. ,vol. 4, pp. 249- 260 ,(2005) , 10.1016/J.HAL.2004.03.004
Robert R. L. Guillard, John H. Ryther, STUDIES OF MARINE PLANKTONIC DIATOMS: I. CYCLOTELLA NANA HUSTEDT, AND DETONULA CONFERVACEA (CLEVE) GRAN. Canadian Journal of Microbiology. ,vol. 8, pp. 229- 239 ,(1962) , 10.1139/M62-029
A. Penna, E. Garcés, M. Vila, M. G. Giacobbe, S. Fraga, A. Lugliè, I. Bravo, E. Bertozzini, C. Vernesi, Alexandrium catenella (Dinophyceae), a toxic ribotype expanding in the NW Mediterranean Sea Marine Biology. ,vol. 148, pp. 13- 23 ,(2005) , 10.1007/S00227-005-0067-5
Bente Edvardsen, Wenche Eikrem, J. C. Green, Robert A. Andersen, Seung Yeo Moon-van der Staay, Linda K. Medlin, Phylogenetic reconstructions of the Haptophyta inferred from 18S ribosomal DNA sequences and available morphological data Phycologia. ,vol. 39, pp. 19- 35 ,(2000) , 10.2216/I0031-8884-39-1-19.1
R. R. L. Guillard, P. E. Hargraves, Stichochrysis immobilis is a diatom, not a chrysophyte Phycologia. ,vol. 32, pp. 234- 236 ,(1993) , 10.2216/I0031-8884-32-3-234.1
NATHALIE SIMON, LISA CAMPBELL, ERLA ORNOLFSDOTTIR, RENE GROBEN, LAURE GUILLOU, MARTIN LANGE, LINDA K. MEDLIN, Oligonucleotide Probes for the Identification of Three Algal Groups by Dot Blot and Fluorescent Whole‐Cell Hybridization Journal of Eukaryotic Microbiology. ,vol. 47, pp. 76- 84 ,(2000) , 10.1111/J.1550-7408.2000.TB00014.X
Robert R. L. Guillard, Culture of Phytoplankton for Feeding Marine Invertebrates Culture of Marine Invertebrate Animals.. pp. 29- 60 ,(1975) , 10.1007/978-1-4615-8714-9_3