Phylogenetic analysis in some Diospyros spp. (Ebenaceae) and Japanese persimmon using chloroplast DNA PCR-RFLP markers
作者： Dechang Hu , Qinglin Zhang , Zhengrong Luo
DOI: 10.1016/J.SCIENTA.2008.02.001
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摘要: Abstract Ten universal primer pairs of chloroplast genome were used to amplify non-coding regions DNA (cpDNA) in 7 Diospyros L. species including 29 genotypes and approximately 20.4 kb, 12.6% the analyzed. The amplified products digested by seven restriction enzymes. results showed that there abundant polymorphisms inter-specific cpDNA within genus . However, it was not observed intra-species variations 22 tested kaki (Japanese persimmon), except for ‘Male strain No. 9’. Persimmon had close relationship with lotus glaucifolia , but distantly virginiana rhombifolia diagram based on principal coordinates analysis Wagner parsimony method. discrepancy digesting pattern suggested genotype Jinzaoshi distinct remaining spp., which revealed may be a new
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sci-hub.se 参考文章(27)
Keizo Yonemori, Akira Sugiura, Masahiko Yamada, Persimmon Genetics and Breeding Plant Breeding Reviews. ,vol. 19, pp. 191- 225 ,(2010) , 10.1002/9780470650172.CH6
WU WEI, ZHENG YOULIANG, CHEN LI, WEI YUMING, YAN ZEHONG, YANG RUIWU, PCR-RFLP analysis of cpDNA and mtDNA in the genus Houttuynia in some areas of China. Hereditas. ,vol. 142, pp. 24- 32 ,(2006) , 10.1111/J.1601-5223.2005.01704.X
B. Van Droogenbroeck, T. Kyndt, I. Maertens, E. Romeijn-Peeters, X. Scheldeman, J. P. Romero-Motochi, P. Van Damme, P. Goetghebeur, G. Gheysen, Phylogenetic analysis of the highland papayas (Vasconcellea) and allied genera (Caricaceae) using PCR-RFLP Theoretical and Applied Genetics. ,vol. 108, pp. 1473- 1486 ,(2004) , 10.1007/S00122-003-1575-7
M. L. Badenes, D. E. Parfitt, Phylogenetic relationships of cultivated Prunus species from an analysis of chloroplast DNA variation. Theoretical and Applied Genetics. ,vol. 90, pp. 1035- 1041 ,(1995) , 10.1007/BF00222918
Akira Sugiura, Young A Choi, Ryutaro Tao, Keizo Yonemori, Genomic distribution of three repetitive DNAs in cultivated hexaploid Diospyros spp. (D. kaki and D. virginiana) and their wild relatives Genes & Genetic Systems. ,vol. 78, pp. 301- 308 ,(2003) , 10.1266/GGS.78.301
Dalong Guo, Haiqing Zhang, Zhengrong Luo, Genetic relationships of Diospyros kaki Thunb. and related species revealed by IRAP and REMAP analysis. Plant Science. ,vol. 170, pp. 528- 533 ,(2006) , 10.1016/J.PLANTSCI.2005.10.006
Shinya Kanzaki, Keizo Yonemori, Akihiko Sato, Masahiko Yamada, Akira Sugiura, Analysis of the Genetic Relationships among Pollination-constant and Non-astringent(PCNA) Cultivars of Persimmon (Diospyros kaki Thunb.) from Japan and China using Amplified Fragment Length Polymorphism(AFLP). Engei Gakkai zasshi. ,vol. 69, pp. 665- 670 ,(2000) , 10.2503/JJSHS.69.665
S. Dumolin‐Lapegue, M.‐H. Pemonge, R. J. Petit, An enlarged set of consensus primers for the study of organelle DNA in plants Molecular Ecology. ,vol. 6, pp. 393- 397 ,(1997) , 10.1046/J.1365-294X.1997.00193.X
Dong Hong ZHUANG, Akira KITAJIMA, Masashi ISHIDA, Yoshitsugu SOBAJIMA, Chromosome numbers of Diospyros kaki cultivars Journal of The Japanese Society for Horticultural Science. ,vol. 59, pp. 289- 297 ,(1990) , 10.2503/JJSHS.59.289
M. Parani, M. Lakshmi, B. Ziegenhagen, M. Fladung, P. Senthilkumar, A. Parida, Molecular phylogeny of mangroves VII. PCR-RFLP of trnS-psbC and rbcL gene regions in 24 mangrove and mangrove-associate species Theoretical and Applied Genetics. ,vol. 100, pp. 454- 460 ,(2000) , 10.1007/S001220050059