Next-generation sequencing of elite berry germplasm and data analysis using a bioinformatics pipeline for virus detection and discovery.

摘要: Berry crops (members of the genera Fragaria, Ribes, Rubus, Sambucus, and Vaccinium) are known hosts for more than 70 viruses new ones identified continually. In modern berry cultivars, tend to be asymptomatic in single infections symptoms only develop after plants accumulate multiple viruses. Most certification programs based on visual observations. Infected, material may propagated nursery system shipped farms where acquire additional symptoms. This practice result disease epidemics with great impact producers natural ecosystem alike. this chapter we present work that allows detection discovery elite germplasm, having potential greatly reduce virus dispersal associated movement propagation material.