Transcriptome Analysis of Core Dinoflagellates Reveals a Universal Bias towards "GC" Rich Codons.
作者： Ernest Williams , Allen Place , Tsvetan Bachvaroff
DOI: 10.3390/MD15050125
关键词:
摘要: … The total GC content of each transcriptome used in this study varied from 51% to 68% GC and were chosen from available transcriptomes to cover the full range of GC content by …
core.ac.uk
mdpi.com
sci-hub.se 参考文章(37)
David P Bartel, MicroRNAs: Genomics, Biogenesis, Mechanism, and Function Cell. ,vol. 116, pp. 281- 297 ,(2004) , 10.1016/S0092-8674(04)00045-5
Daniel G. Baden, Brevetoxins: unique polyether dinoflagellate toxins. The FASEB Journal. ,vol. 3, pp. 1807- 1817 ,(1989) , 10.1096/FASEBJ.3.7.2565840
Paul B. Talbert, Steven Henikoff, Chromatin: packaging without nucleosomes. Current Biology. ,vol. 22, ,(2012) , 10.1016/J.CUB.2012.10.052
Sebastian Baumgarten, Till Bayer, Manuel Aranda, Yi Liew, Adrian Carr, Gos Micklem, Christian R Voolstra, Integrating microRNA and mRNA expression profiling in Symbiodinium microadriaticum, a dinoflagellate symbiont of reef-building corals BMC Genomics. ,vol. 14, pp. 704- 704 ,(2013) , 10.1186/1471-2164-14-704
Toshihiro Houdai, Shigeru Matsuoka, Michio Murata, Masayuki Satake, Sayo Ota, Yasukatsu Oshima, Lesley L Rhodes, Acetate labeling patterns of dinoflagellate polyketides, amphidinols 2, 3 and 4 Tetrahedron. ,vol. 57, pp. 5551- 5555 ,(2001) , 10.1016/S0040-4020(01)00481-1
David L. Spector, Richard E. Triemer, Chromosome structure and mitosis in the dinoflagellates: An ultrastructural approach to an evolutionary problem Biosystems. ,vol. 14, pp. 289- 298 ,(1981) , 10.1016/0303-2647(81)90035-6
Tetsuya Seki, Masayuki Satake, Lincoln Mackenzie, Heinrich F. Kaspar, Takeshi Yasumoto, Gymnodimine, a new marine toxin of unprecedented structure isolated from New Zealand oysters and the dinoflagellate, Gymnodinium sp. Tetrahedron Letters. ,vol. 36, pp. 7093- 7096 ,(1995) , 10.1016/0040-4039(95)01434-J
Tsvetan R. Bachvaroff, Sebastian G. Gornik, Gregory T. Concepcion, Ross F. Waller, Gregory S. Mendez, J. Casey Lippmeier, Charles F. Delwiche, Dinoflagellate phylogeny revisited: Using ribosomal proteins to resolve deep branching dinoflagellate clades Molecular Phylogenetics and Evolution. ,vol. 70, pp. 314- 322 ,(2014) , 10.1016/J.YMPEV.2013.10.007
Mian Zhou, Jinhu Guo, Joonseok Cha, Michael Chae, She Chen, Jose M. Barral, Matthew S. Sachs, Yi Liu, Non-optimal codon usage affects expression, structure and function of clock protein FRQ Nature. ,vol. 495, pp. 111- 115 ,(2013) , 10.1038/NATURE11833
Yu-Dong Li, Yong-Quan Li, Jian-shu Chen, Hui-jun Dong, Wen-Jun Guan, Hong Zhou, Whole genome analysis of non-optimal codon usage in secretory signal sequences of Streptomyces coelicolor BioSystems. ,vol. 85, pp. 225- 230 ,(2006) , 10.1016/J.BIOSYSTEMS.2006.02.006