Hydrophobic Mismatch Modulates Stability and Plasticity of Human Mitochondrial VDAC2

作者: Shashank Ranjan Srivastava , Punit Zadafiya , Radhakrishnan Mahalakshmi

DOI: 10.1016/J.BPJ.2018.11.001

关键词:

摘要: The human mitochondrial outer membrane protein voltage-dependent anion channel isoform 2 (hVDAC2) is a β-barrel metabolite flux that indispensable for cell survival. It well established physical forces imposed on transmembrane by its surrounding lipid environment decide structure and stability. Yet, how the protein-lipid interplay together regulate hVDAC2 stability unknown. Here, we combine experimental biophysical investigations of with all-atom molecular dynamics simulations to study effect most abundant phosphocholine (PC) lipids hVDAC2. We demonstrate experimentally increasing PC acyl chain length from diC14:0 diC18:0-PC has nonlinear β-barrel. show highest in diC16:0-PC, which exhibits negative mismatch barrel. Our also reveal structural rigidity under optimal provided diC16:0-PC bilayers. Further, validate our observations altering properties membranes indirectly using cholesterol. propose VDAC plasticity are modulated bilayer.

参考文章(50)
D Ardail, P Louisot, F Lerme, J P Privat, C Levrat, M Egret-Charlier, Mitochondrial contact sites. Lipid composition and dynamics. Journal of Biological Chemistry. ,vol. 265, pp. 18797- 18802 ,(1990) , 10.1016/S0021-9258(17)30583-5
Svetlana Rajkumar Maurya, Radhakrishnan Mahalakshmi, N-helix and Cysteines Inter-regulate Human Mitochondrial VDAC-2 Function and Biochemistry. Journal of Biological Chemistry. ,vol. 290, pp. 30240- 30252 ,(2015) , 10.1074/JBC.M115.693978
Anthony G. Lee, Lipid–protein interactions Biochemical Society Transactions. ,vol. 39, pp. 761- 766 ,(2011) , 10.1042/BST0390761
Viktoria Betaneli, Eugene P. Petrov, Petra Schwille, The Role of Lipids in VDAC Oligomerization Biophysical Journal. ,vol. 102, pp. 523- 531 ,(2012) , 10.1016/J.BPJ.2011.12.049
Johann Schredelseker, Aviv Paz, Carlos J. López, Christian Altenbach, Calvin S. Leung, Maria K. Drexler, Jau-Nian Chen, Wayne L. Hubbell, Jeff Abramson, High Resolution Structure and Double Electron-Electron Resonance of the Zebrafish Voltage-dependent Anion Channel 2 Reveal an Oligomeric Population Journal of Biological Chemistry. ,vol. 289, pp. 12566- 12577 ,(2014) , 10.1074/JBC.M113.497438
S. Hiller, R. G. Garces, T. J. Malia, V. Y. Orekhov, M. Colombini, G. Wagner, Solution structure of the integral human membrane protein VDAC-1 in detergent micelles. Science. ,vol. 321, pp. 1206- 1210 ,(2008) , 10.1126/SCIENCE.1161302
Susanne E. Horvath, Günther Daum, Lipids of mitochondria. Progress in Lipid Research. ,vol. 52, pp. 590- 614 ,(2013) , 10.1016/J.PLIPRES.2013.07.002
Shay Geula, Hammad Naveed, Jie Liang, Varda Shoshan-Barmatz, Structure-based Analysis of VDAC1 Protein: DEFINING OLIGOMER CONTACT SITES* Journal of Biological Chemistry. ,vol. 287, pp. 2179- 2190 ,(2012) , 10.1074/JBC.M111.268920
Anthony G. Lee, Biological membranes: the importance of molecular detail Trends in Biochemical Sciences. ,vol. 36, pp. 493- 500 ,(2011) , 10.1016/J.TIBS.2011.06.007
Anthony G. Lee, How lipids affect the activities of integral membrane proteins Biochimica et Biophysica Acta (BBA) - Biomembranes. ,vol. 1666, pp. 62- 87 ,(2004) , 10.1016/J.BBAMEM.2004.05.012