Rhizobium ruizarguesonis sp. nov., isolated from nodules of Pisum sativum L.

作者: Beatriz Jorrin , José Manuel Palacios , Álvaro Peix , Juan Imperial

DOI: 10.1016/J.SYAPM.2020.126090

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摘要: Abstract Four strains, coded as UPM1132, UPM1133T, UPM1134 and UPM1135, isolated from nodules of Pisum sativum plants grown on Ni-rich soils were characterised through a polyphasic taxonomy approach. Their 16S rRNA gene sequences identical showed 100% similarity with their closest phylogenetic neighbors, the species included in ‘R. leguminosarum group’: R. laguerreae FB206T, USDA 2370T, anhuiense CCBAU 23252T, sophoreae 03386T, acidisoli FH13T hidalgonense FH14T, 99.6% sequence esperanzae CNPSo 668T. The analysis combined housekeeping genes recA, atpD glnII similarities 92-95% relatives. Whole genome average nucleotide identity (ANI) values 97.5-99.7% ANIb among four less than 92.4% closely related species, while digital DNA-DNA hybridization (dDDH) 82-85% within our strains 34-52% species. Major fatty acids strain UPM1133T C18:1 ω7c / ω6c summed feature 8, C14:0 3OH/ C16:1 iso I 2 C18:0. Colonies small to medium, pearl-white coloured YMA at 28 °C growth was observed ranges 8-34 °C, pH 5.5-7.5 0-0.7% (w/v) NaCl. DNA G + C content 60.8 mol %. genotypic, phenotypic chemotaxonomic data support classification UPM1135 into novel Rhizobium, for which name Rhizobium ruizarguesonis sp. nov. is proposed. type (=CECT 9542T = LMG 30526T).

参考文章(42)
A Leyva, J M Palacios, J Murillo, T Ruiz-Argüeso, Genetic organization of the hydrogen uptake (hup) cluster from Rhizobium leguminosarum. Journal of Bacteriology. ,vol. 172, pp. 1647- 1655 ,(1990) , 10.1128/JB.172.3.1647-1655.1990
Antonio Leyva, José M. Palacios, Tomás Ruiz-Argüeso, Conserved Plasmid Hydrogen-Uptake (hup)-Specific Sequences within Hup+Rhizobium leguminosarum Strains Applied and Environmental Microbiology. ,vol. 53, pp. 2539- 2543 ,(1987) , 10.1128/AEM.53.10.2539-2543.1987
A Leyva, J M Palacios, T Mozo, T Ruiz-Argüeso, Cloning and characterization of hydrogen uptake genes from Rhizobium leguminosarum. Journal of Bacteriology. ,vol. 169, pp. 4929- 4934 ,(1987) , 10.1128/JB.169.11.4929-4934.1987
Yu Jing Zhang, Wen Tao Zheng, Isobel Everall, J. Peter W. Young, Xiao Xia Zhang, Chang Fu Tian, Xin Hua Sui, En Tao Wang, Wen Xin Chen, Rhizobium anhuiense sp. nov., isolated from effective nodules of Vicia faba and Pisum sativum. International Journal of Systematic and Evolutionary Microbiology. ,vol. 65, pp. 2960- 2967 ,(2015) , 10.1099/IJS.0.000365
Luis Rey, Jesus Murillo, Yolanda Hernando, Elena Hidalgo, Ezequiel Cabrera, Juan Imperial, Tomás Ruiz-Argüeso, Molecular analysis of a microaerobically induced operon required for hydrogenase synthesis in Rhizobium leguminosarum biovar viciae Molecular Microbiology. ,vol. 8, pp. 471- 481 ,(1993) , 10.1111/J.1365-2958.1993.TB01591.X
Jose M. Palacios, Jesús Murillo, Antonio Leyva, Gary Ditta, Tomás Ruiz-Argüeso, Differential expression of hydrogen uptake (hup) genes in vegetative and symbiotic cells of Rhizobium leguminosarum. Molecular Genetics and Genomics. ,vol. 221, pp. 363- 370 ,(1990) , 10.1007/BF00259401
Tomas Ruiz-Arg�eso, Joe Hanus, Harold J. Evans, Hydrogen production and uptake by pea nodules as affected by strains of Rhizobium leguminosarum Archives of Microbiology. ,vol. 116, pp. 113- 118 ,(1978) , 10.1007/BF00406025
Tomás Ruiz-Argüeso, David W. Emerich, Harold J. Evans, Hydrogenase system in legume nodules: A mechanism of providing nitrogenase with energy and protection from oxygen damage Biochemical and Biophysical Research Communications. ,vol. 86, pp. 259- 264 ,(1979) , 10.1016/0006-291X(79)90860-X
Sabrine Saïdi, Martha-Helena Ramírez-Bahena, Nery Santillana, Doris Zúñiga, Estela Álvarez-Martínez, Alvaro Peix, Ridha Mhamdi, Encarna Velázquez, Rhizobium laguerreae sp. nov. nodulates Vicia faba on several continents International Journal of Systematic and Evolutionary Microbiology. ,vol. 64, pp. 242- 247 ,(2014) , 10.1099/IJS.0.052191-0