Subtractive hybridization--genetic takeaways and the search for meaning.

作者: Richard J. Byers , Judith A. Hoyland , Janet Dixon , Anthony J. Freemont

DOI: 10.1046/J.1365-2613.2000.00174.X

关键词:

摘要: Gene expression profiling relies on mRNA extraction from defined cell systems, which in the case of pathological processes necessarily results use small quantities tissues, sometimes as little a few cells. This obviates many systems gene and is best carried out using cDNA amplified by poly(A) reverse transcription polymerase chain reaction, capable generating material representative all expressed genes samples one cell. Analysis this subtractive hybridization compares at different stages biological/pathological process allowing identification upregulated during process. The present not dependent their prior description or choice used screen such method ideal for identifying novel unsuspected genes. We have to identify involved normal osteoblastic differentiation Paget's disease bone it has been widely study number systems. method, its applications relationship with other methods are reviewed.

参考文章(112)
O. Labudova, N. Cairns, E. Kitzmüller, G. Lubec, Impaired brain glucose metabolism in patients with Down syndrome. Journal of Neural Transmission-supplement. ,vol. 57, pp. 247- 256 ,(1999) , 10.1007/978-3-7091-6380-1_16
R. Seidl, M. Bajo, K. Böhm, E. C. LaCasse, A. E. MacKenzie, N. Cairns, G. Lubec, Neuronal apoptosis inhibitory protein (NAIP)-like immunoreactivity in brains of adult patients with Down syndrome Journal of Neural Transmission-supplement. ,vol. 57, pp. 283- 291 ,(1999) , 10.1007/978-3-7091-6380-1_19
G. Lubec, O. Labudova, N. Cairns, P. Berndt, H. Langen, M. Fountoulakis, Reduced aldehyde dehydrogenase levels in the brain of patients with Down syndrome. Journal of Neural Transmission-supplement. ,vol. 57, pp. 21- 40 ,(1999) , 10.1007/978-3-7091-6380-1_2
E. Kitzmueller, O. Labudova, H. Rink, N. Cairns, G. Lubec, Altered gene expression in fetal Down syndrome brain as revealed by the gene hunting technique of subtractive hybridization. Journal of Neural Transmission-supplement. ,vol. 57, pp. 99- 124 ,(1999) , 10.1007/978-3-7091-6380-1_7
Gerard Brady, Norman Niscove, Construction of cDNA libraries from single cells. Methods in Enzymology. ,vol. 225, pp. 611- 623 ,(1993) , 10.1016/0076-6879(93)25039-5
David E. Wazer, Kiyoko Watanabe, Xiao Long Liu, Vimla Band, Identification of a Novel Serine Protease-like Gene, the Expression of Which Is Down-Regulated during Breast Cancer Progression Cancer Research. ,vol. 56, pp. 3371- 3379 ,(1996)
Hong Xin, James C. Stephans, Xiaozhu Duan, Greg Harrowe, Esther Kim, Uta Grieshammer, Chris Kingsley, Klaus Giese, Identification of a novel aspartic-like protease differentially expressed in human breast cancer cell lines. Biochimica et Biophysica Acta. ,vol. 1501, pp. 125- 137 ,(2000) , 10.1016/S0925-4439(00)00014-4
Arthur B. Pardee, Khandan Keyomarsi, Lidia Averboukh, Ruth Sager, Peng Liang, Differential display and cloning of messenger RNAs from human breast cancer versus mammary epithelial cells. Cancer Research. ,vol. 52, pp. 6966- 6968 ,(1992)
Luda Diatchenko, Sergey Lukyanov, Yun-Fai Chris Lau, Paul D. Siebert, Suppression subtractive hybridization: a versatile method for identifying differentially expressed genes. Methods in Enzymology. ,vol. 303, pp. 349- 380 ,(1999) , 10.1016/S0076-6879(99)03022-0
Jean-Philippe Girard, Espen S. Baekkevold, Takeshi Yamanaka, Guttorm Haraldsen, Per Brandtzaeg, François Amalric, Heterogeneity of Endothelial Cells: The Specialized Phenotype of Human High Endothelial Venules Characterized by Suppression Subtractive Hybridization American Journal of Pathology. ,vol. 155, pp. 2043- 2055 ,(1999) , 10.1016/S0002-9440(10)65523-X