Development of oligonucleotide primers from the 16S-23S rRNA intergenic sequences for identifying different dairy and probiotic lactic acid bacteria by PCR

作者: Anu Tilsala-Timisjärvi , Tapani Alatossava

DOI: 10.1016/S0168-1605(97)88066-X

关键词:

摘要: Spacer regions between the 16S and 23S rRNA genes of different dairy probiotic lactic acid bacteria were amplified by polymerase chain reaction (PCR) with conserved primers nucleotide sequences these spacer determined. Amplification/oligonucleotide primer pairs designed for Lactobacillus paracasei, rhamnosus, delbrueckii, acidophilus, helveticus Streptococcus thermophilus based on differences in 16S-23S regions. Also a pair identifying both Lb. paracasei rhamnosus was designed. In addition to conventional PCR heat block rapid method an Air Thermocycler (ATC) glass capillaries used.

参考文章(22)
B Decaris, Y Roussel, J M Simonet, C Colmin, Strain characterization, genome size and plasmid content in the Lactobacillus acidophilus group (Hansen and Mocquot). Journal of Applied Microbiology. ,vol. 74, pp. 549- 556 ,(1993)
C. T. Wittwer, D. J. Garling, Rapid cycle DNA amplification : time and temperature optimization BioTechniques. ,vol. 10, pp. 76- 83 ,(1991)
R C Levesque, M C Lavoie, J R Valero, S N Bourque, Comparative Analysis of the 16S to 23S Ribosomal Intergenic Spacer Sequences of Bacillus thuringiensis Strains and Subspecies and of Closely Related Species. Applied and Environmental Microbiology. ,vol. 61, pp. 1623- 1626 ,(1995) , 10.1128/AEM.61.7.2811-2811B.1995
T Nakagawa, M Shimada, H Mukai, K Asada, I Kato, K Fujino, T Sato, Detection of alcohol-tolerant Hiochi bacteria by PCR Applied and Environmental Microbiology. ,vol. 60, pp. 637- 640 ,(1994) , 10.1128/AEM.60.2.637-640.1994
D L Tulloch, L R Finch, A J Hillier, B E Davidson, Physical map of the chromosome of Lactococcus lactis subsp. lactis DL11 and localization of six putative rRNA operons. Journal of Bacteriology. ,vol. 173, pp. 2768- 2775 ,(1991) , 10.1128/JB.173.9.2768-2775.1991
S. Gorbach, S. Salminen, M. Deighton, Lactic acid bacteria in health and disease. Lactic acid bacteria.. pp. 199- 225 ,(1993)
Seppo Salminen, Lactic Acid Bacteria ,(1993)
Christian Hertel, Wolfgang Ludwig, Bruno Pot, Karel Kersters, Karl-Heinz Schleifer, Differentiation of Lactobacilli Occurring in Fermented Milk Products by Using Oligonucleotide Probes and Electrophoretic Protein Profiles Systematic and Applied Microbiology. ,vol. 16, pp. 463- 467 ,(1993) , 10.1016/S0723-2020(11)80281-X
Bruno Chevallier, Jean-Claude Hubert, Benoît Kammerer, Determination of chromosome size and number of rrn loci in Lactobacillus plantarum by pulsed-field gel electrophoresis Fems Microbiology Letters. ,vol. 120, pp. 51- 56 ,(1994) , 10.1111/J.1574-6968.1994.TB07006.X
Takashi Uemori, Kiyozo Asada, Ikunoshin Kato, RyÔ Harasawa, Amplification of the 16S-23S Spacer Region in rRNA Operons of Mycoplasmas by the Polymerase Chain Reaction Systematic and Applied Microbiology. ,vol. 15, pp. 181- 186 ,(1992) , 10.1016/S0723-2020(11)80089-5