Alternative splicing: enhancing ability to cope with stress via transcriptome plasticity.

作者: Anna M. Mastrangelo , Daniela Marone , Giovanni Laidò , Anna M. De Leonardis , Pasquale De Vita

DOI: 10.1016/J.PLANTSCI.2011.09.006

关键词:

摘要: Alternative splicing is a mechanism for the regulation of gene expression that widespread in higher eukaryotes. Genome-wide approaches, based on comparison expressed and genomic sequences, tiling arrays, next-generation sequencing, have provided growing knowledge extent, distribution association alternative with stress-related genes plants. The functional meaning response to stress has been defined many genes, particular those involved responses, such as protein kinases, transcription factors, regulators pathogen-resistance genes. production proteins diverse domain rearrangements from same main plant abiotic also characterized by second mechanism, which consists transcripts are targeted nonsense-mediated decay. These quantitatively regulate expression. Many events well conserved among species, across kingdoms, especially observed stress, encoding regulators, other classes RNA-binding proteins. Nevertheless, non-conserved indicate represents an evolutionary strategy rapidly increases genome plasticity develops new functions, along mechanisms duplication. Finally, study naturally occurring variability identification regions crops proposed strategies selecting genotypes superior performance under adverse environmental conditions.

参考文章(90)
Przemysław Lehmann, Structure and evolution of plant disease resistance genes Journal of Applied Genetics. ,vol. 43, pp. 403- 414 ,(2002)
Saiprasad GOUD PALUSA, Gul SHAD ALI, Anireddy SN REDDY, None, Alternative splicing of pre‐mRNAs of Arabidopsis serine/arginine‐rich proteins: regulation by hormones and stresses Plant Journal. ,vol. 49, pp. 1091- 1107 ,(2007) , 10.1111/J.1365-313X.2006.03020.X
Nils Rostoks, Brian J. Steffenson, Andris Kleinhofs, Structure and expression of the barley stem rust resistance gene Rpg1 messenger RNA Physiological and Molecular Plant Pathology. ,vol. 64, pp. 91- 101 ,(2004) , 10.1016/J.PMPP.2004.05.006
Luca Comai, Genetic and epigenetic interactions in allopolyploid plants Plant Molecular Biology. ,vol. 43, pp. 387- 399 ,(2000) , 10.1023/A:1006480722854
Sarah Morran, Omid Eini, Tatiana Pyvovarenko, Boris Parent, Rohan Singh, Ainur Ismagul, Serik Eliby, Neil Shirley, Peter Langridge, Sergiy Lopato, Improvement of stress tolerance of wheat and barley by modulation of expression of DREB⁄CBF factors Plant Biotechnology Journal. ,vol. 9, pp. 230- 249 ,(2011) , 10.1111/J.1467-7652.2010.00547.X
Xuebo Hu, Huijuan Zhang, Guojun Li, Yuxia Yang, Zhong Zheng, Fengming Song, None, Ectopic expression of a rice protein phosphatase 2C gene OsBIPP2C2 in tobacco improves disease resistance Plant Cell Reports. ,vol. 28, pp. 985- 995 ,(2009) , 10.1007/S00299-009-0701-7
J. P. Tam, Y.-A. Lu, J.-L. Yang, K.-W. Chiu, An unusual structural motif of antimicrobial peptides containing end-to-end macrocycle and cystine-knot disulfides Proceedings of the National Academy of Sciences of the United States of America. ,vol. 96, pp. 8913- 8918 ,(1999) , 10.1073/PNAS.96.16.8913
Sung Cheol Koo, Hae Won Yoon, Cha Young Kim, Byeong Cheol Moon, Yong Hwa Cheong, Hay Ju Han, Sang Min Lee, Kyu Young Kang, Min Chul Kim, Sang Yeol Lee, Woo Sik Chung, Moo Je Cho, Alternative splicing of the OsBWMK1 gene generates three transcript variants showing differential subcellular localizations. Biochemical and Biophysical Research Communications. ,vol. 360, pp. 188- 193 ,(2007) , 10.1016/J.BBRC.2007.06.052
Eddo Kim, Alon Magen, Gil Ast, Different levels of alternative splicing among eukaryotes Nucleic Acids Research. ,vol. 35, pp. 125- 131 ,(2007) , 10.1093/NAR/GKL924