Sphingomonas aurantiaca sp. nov., Sphingomonas aerolata sp. nov. and Sphingomonas faeni sp. nov., air- and dustborne and Antarctic, orange-pigmented, psychrotolerant bacteria, and emended description of the genus Sphingomonas.

作者: Hans-Jürgen Busse , Ewald B. M. Denner , Sandra Buczolits , Mirja Salkinoja-Salonen , Antonio Bennasar

DOI: 10.1099/IJS.0.02461-0

关键词:

摘要: Seven psychrotolerant, Gram-negative bacterial strains, five dust- and airborne isolates (MA101bT, MA306a, MA405/90, MA-olkiT NW12T) two from the Antarctic (Ant 20 M3C203B-B), were subjected to a polyphasic characterization determine their taxonomic position. High 16S rDNA sequences similarities (99·3–100·0 %) demonstrated that they closely related each other. Phylogenetic evaluation of revealed are members genus Sphingomonas sensu stricto, encompassing separate branch within this genus. They shared 94·4–96·6 % sequence similarity with species All Sphingomonas-specific signature nucleotides also detected. The presence major ubiquinone Q-10, sym-homospermidine as predominant polyamine, Sphingomonadaceae-specific sphingoglycolipid in polar lipid patterns fatty acid profile containing C14 : 0 2-OH lacking 3-OH acids agreement identification these strains stricto. Results DNA–DNA hybridizations comparison protein indicated seven three distinct species. One is represented by MA101bT, MA306a second NW12T, Ant M3C203B-B third one strain, MA-olkiT. Their distinction at level was supported results biochemical partly riboprints genomic fingerprints. On basis results, novel proposed: aurantiaca sp. nov., consisting MA101bT (=DSM 14748T=LMG 21377T), MA405/90 14749=LMG 21378), faeni nov. 14747T=LMG 21379T) aerolata NW12T 14746T=LMG 21376T), (=ICMP 13599) (=SMCC M3C203B-B).

参考文章(31)
THOMAS H. JUKES, CHARLES R. CANTOR, CHAPTER 24 – Evolution of Protein Molecules Mammalian Protein Metabolism#R##N#Volume III. pp. 21- 132 ,(1969) , 10.1016/B978-1-4832-3211-9.50009-7
Sandra Buczolits, Ewald B M Denner, Dietmar Vybiral, Monika Wieser, Peter Kämpfer, Hans-Jürgen Busse, Classification of three airborne bacteria and proposal of Hymenobacter aerophilus sp. nov International Journal of Systematic and Evolutionary Microbiology. ,vol. 52, pp. 445- 456 ,(2002) , 10.1099/00207713-52-2-445
J. Busse, G. Auling, Polyamine Pattern as a Chemotaxonomic Marker within the Proteobacteria Systematic and Applied Microbiology. ,vol. 11, pp. 1- 8 ,(1988) , 10.1016/S0723-2020(88)80040-7
Brent C. Christner, Ellen Mosley-Thompson, Lonnie G. Thompson, John N. Reeve, Isolation of bacteria and 16S rDNAs from Lake Vostok accretion ice. Environmental Microbiology. ,vol. 3, pp. 570- 577 ,(2001) , 10.1046/J.1462-2920.2001.00226.X
Takichi Kaneko, Kiyoaki Katoh, Masao Fujimoto, Masao Kumagai, Jin Tamaoka, Yoko Katayama-Fujimura, Determination of the nucleotide composition of a deoxyribonucleic acid by high-performance liquid chromatography of its enzymatic hydrlysate: a review Journal of Microbiological Methods. ,vol. 4, pp. 229- 240 ,(1986) , 10.1016/0167-7012(86)90034-5
Hans-Jürgen Busse, Alexander Kainz, Irina V. Tsitko, Mirja Salkinoja-Salonen, Riboprints as a tool for rapid preliminary identification of sphingomonads. Systematic and Applied Microbiology. ,vol. 23, pp. 115- 123 ,(2000) , 10.1016/S0723-2020(00)80052-1
P. Brimblecombe, N. Blades, D. Camuffo, G. Sturaro, A. Valentino, K. Gysels, R. Grieken, H.-J. Busse, O. Kim, U. Ulrych, M. Wieser, The Indoor Environment of a Modern Museum Building, The Sainsbury Centre for Visual Arts, Norwich, UK Indoor Air. ,vol. 9, pp. 146- 164 ,(1999) , 10.1111/J.1600-0668.1999.T01-1-00002.X
B.J. Tindall, Lipid composition of Halobacterium lacusprofundi Fems Microbiology Letters. ,vol. 66, pp. 199- 202 ,(1990) , 10.1111/J.1574-6968.1990.TB03996.X
Robin R. Gutell, Bryn Weiser, Carl R. Woese, Harry F. Noller, Comparative anatomy of 16-S-like ribosomal RNA. Progress in Nucleic Acid Research and Molecular Biology. ,vol. 32, pp. 155- 216 ,(1985) , 10.1016/S0079-6603(08)60348-7