Analysis of differential protein expression in Acidithiobacillus ferrooxidans grown under different energy resources respectively using SELDI-ProteinChip technologies.

作者: Zhiguo He , Hui Zhong , Yuehua Hu , Shengmu Xiao , Jin Xu

DOI: 10.1016/J.MIMET.2005.06.006

关键词:

摘要: Abstract Surface-enhanced laser desorption/ionization (SELDI)-time of flight is an affinity-based mass spectrometric method in which proteins interest are selectively absorbed to a chemically modified surface on chip, allows proteomic analysis with limited material requirements. This characteristic makes it valuable technique for microbiologists handling problematic samples, such as low cell number cultures. In this study, we explored differential-expressed proteome Acidithiobacillus ferrooxidans cultivated Fe 2+ and elemental sulfur separately by adopting the protein biochip SELDI approach. The lysates A. were applied onto Ciphergen ProteinChip WCX2, SAX2 IMAC-Cu arrays. Proteins bound chips analyzed Reader Model PBS II. A summary molecular masses differentially regulated found was obtained 28 expressed weight range 5.0 25 kDa.

参考文章(35)
D E Rawlings, T Kusano, Molecular genetics of Thiobacillus ferrooxidans Microbiological Research. ,vol. 58, pp. 39- 55 ,(1994) , 10.1128/MMBR.58.1.39-55.1994
Odile Carrette, Isabelle Demalte, Alexander Scherl, Oezkarn Yalkinoglu, Garry Corthals, Pierre Burkhard, Denis F. Hochstrasser, Jean-Charles Sanchez, A panel of cerebrospinal fluid potential biomarkers for the diagnosis of Alzheimer's disease. Proteomics. ,vol. 3, pp. 1486- 1494 ,(2003) , 10.1002/PMIC.200300470
Jeffrey C. Howard, Christine Heinemann, Bradley J. Thatcher, Brian Martin, Bing Siang Gan, Gregor Reid, Identification of Collagen-Binding Proteins in Lactobacillus spp. with Surface-Enhanced Laser Desorption/Ionization–Time of Flight ProteinChip Technology Applied and Environmental Microbiology. ,vol. 66, pp. 4396- 4400 ,(2000) , 10.1128/AEM.66.10.4396-4400.2000
A. Schippers, T. Rohwerder, W. Sand, Intermediary sulfur compounds in pyrite oxidation: implications for bioleaching and biodepyritization of coal Applied Microbiology and Biotechnology. ,vol. 52, pp. 104- 110 ,(1999) , 10.1007/S002530051495
Tatyana A Zhukov, Roy A Johanson, Alan B Cantor, Robert A Clark, Melvyn S Tockman, Discovery of distinct protein profiles specific for lung tumors and pre-malignant lung lesions by SELDI mass spectrometry Lung Cancer. ,vol. 40, pp. 267- 279 ,(2003) , 10.1016/S0169-5002(03)00082-5
Michael D.P Boyle, Terence G Romer, Amanda K Meeker, Darren D Sledjeski, Use of surface-enhanced laser desorption ionization protein chip system to analyze streptococcal exotoxin B activity secreted by Streptococcus pyogenes. Journal of Microbiological Methods. ,vol. 46, pp. 87- 97 ,(2001) , 10.1016/S0167-7012(01)00279-2
Vincenzo Buonfiglio, Mario Polidoro, Ferda Soyer, Piera Valenti, Jessup Shively, A novel gene encoding a sulfur-regulated outer membrane protein in Thiobacillus ferrooxidans Journal of Biotechnology. ,vol. 72, pp. 85- 93 ,(1999) , 10.1016/S0168-1656(99)00097-8
Zhi-guo He, Yue-Hua Hu, Hui Zhong, Wei-Xin Hu, Jin Xu, Preliminary proteomic analysis of Thiobacillus ferrooxidans growing on elemental sulphur and Fe2+ separately Journal of Biochemistry and Molecular Biology. ,vol. 38, pp. 307- 313 ,(2005) , 10.5483/BMBREP.2005.38.3.307
M. Nemati, C. Webb, Effect of ferrous iron concentration on the catalytic activity of immobilized cells of Thiobacillus ferrooxidans Applied Microbiology and Biotechnology. ,vol. 46, pp. 250- 255 ,(1996) , 10.1007/S002530050812