Learning to Reconstruct Confocal Microscopy Stacks from Single Light Field Images.

作者: Josue Page Vizcaino , Federico Saltarin , Yury Belyaev , Ruth Lyck , Tobias Lasser

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摘要: … We start with a description of our light field microscope and our design criteria in section III-A… present our procedure to acquire corresponding light field images and confocal stack scans …

参考文章(34)
Philipp Fischer, Thomas Brox, None, U-Net: Convolutional Networks for Biomedical Image Segmentation medical image computing and computer assisted intervention. pp. 234- 241 ,(2015) , 10.1007/978-3-319-24574-4_28
Michael Broxton, Logan Grosenick, Samuel Yang, Noy Cohen, Aaron Andalman, Karl Deisseroth, Marc Levoy, Wave optics theory and 3-D deconvolution for the light field microscope Optics Express. ,vol. 21, pp. 25418- 25439 ,(2013) , 10.1364/OE.21.025418
Robert Prevedel, Young-Gyu Yoon, Maximilian Hoffmann, Nikita Pak, Gordon Wetzstein, Saul Kato, Tina Schrödel, Ramesh Raskar, Manuel Zimmer, Edward S Boyden, Alipasha Vaziri, Simultaneous whole-animal 3D imaging of neuronal activity using light-field microscopy Nature Methods. ,vol. 11, pp. 727- 730 ,(2014) , 10.1038/NMETH.2964
Marc Levoy, Ren Ng, Andrew Adams, Matthew Footer, Mark Horowitz, Light field microscopy international conference on computer graphics and interactive techniques. ,vol. 25, pp. 924- 934 ,(2006) , 10.1145/1141911.1141976
Noy Cohen, Samuel Yang, Aaron Andalman, Michael Broxton, Logan Grosenick, Karl Deisseroth, Mark Horowitz, Marc Levoy, Enhancing the performance of the light field microscope using wavefront coding Optics Express. ,vol. 22, pp. 24817- 24839 ,(2014) , 10.1364/OE.22.024817
Chia-Kai Liang, Graham Myhre, Colvin Pitts, Kurt Akeley, Improving light field camera sample design with irregularity and aberration ACM Transactions on Graphics. ,vol. 34, pp. 1- 11 ,(2015) , 10.1145/2766885
T. E. Bishop, P. Favaro, The Light Field Camera: Extended Depth of Field, Aliasing, and Superresolution IEEE Transactions on Pattern Analysis and Machine Intelligence. ,vol. 34, pp. 972- 986 ,(2012) , 10.1109/TPAMI.2011.168
Logan Grosenick, Todd Anderson, Stephen J. Smith, Elastic source selection for in vivo imaging of neuronal ensembles international symposium on biomedical imaging. pp. 1263- 1266 ,(2009) , 10.1109/ISBI.2009.5193292
Andrew Lumsdaine, Todor Georgiev, The focused plenoptic camera international conference on computational photography. pp. 1- 8 ,(2009) , 10.1109/ICCPHOT.2009.5559008
Z. Wang, A.C. Bovik, H.R. Sheikh, E.P. Simoncelli, Image quality assessment: from error visibility to structural similarity IEEE Transactions on Image Processing. ,vol. 13, pp. 600- 612 ,(2004) , 10.1109/TIP.2003.819861