Gene Expression Profiles of Sporadic Canine Hemangiosarcoma Are Uniquely Associated with Breed

作者: Beth A. Tamburini , Susan Trapp , Tzu Lip Phang , Jill T. Schappa , Lawrence E. Hunter

DOI: 10.1371/JOURNAL.PONE.0005549

关键词:

摘要: The role an individual's genetic background plays on phenotype and biological behavior of sporadic tumors remains incompletely understood. We showed previously that lymphomas from Golden Retrievers harbor defined, recurrent chromosomal aberrations occur less frequently in other dog breeds, suggesting spontaneous canine provide suitable models to define how heritable traits influence cancer genotypes. Here, we report a complementary approach using gene expression profiling naturally occurring endothelial sarcoma dogs (hemangiosarcoma). Naturally hemangiosarcomas clustered separately those non-Golden Retrievers, with contributions transcription factors, survival pro-inflammatory angiogenic genes, which were exclusively present hemangiosarcoma not or normal cells (i.e., they due simply variation these genes among breeds). Vascular Endothelial Growth Factor Receptor 1 (VEGFR1) was preferentially enriched within known pathways derived set enrichment analysis when characterizing versus breeds. Heightened VEGFR1 also apparent at the protein level targeted inhibition increased proliferation but Our results suggest factors mold phenotypes, consequently sporadic, tumors.

参考文章(51)
José A. Ferreira, Aeilko Zwinderman, Approximate Sample Size Calculations with Microarray Data: An Illustration Statistical Applications in Genetics and Molecular Biology. ,vol. 5, pp. 25- ,(2006) , 10.2202/1544-6115.1227
Goldschmidt Mh, Glickman Lt, McKee Lj, Prymak C, Epidemiologic, clinical, pathologic, and prognostic characteristics of splenic hemangiosarcoma and splenic hematoma in dogs: 217 cases (1985). Javma-journal of The American Veterinary Medical Association. ,vol. 193, pp. 706- 712 ,(1988)
Rafael A Irizarry, Siew Loon Ooi, Zhijin Wu, Jef D Boeke, Use of Mixture Models in a Microarray-Based Screening Procedure for Detecting Differentially Represented Yeast Mutants Statistical Applications in Genetics and Molecular Biology. ,vol. 2, pp. 1- 19 ,(2003) , 10.2202/1544-6115.1002
Priester Wa, McKay Fw, The occurrence of tumors in domestic animals. National Cancer Institute monograph. pp. 1- 210 ,(1980)
GrierP Page, JodeW Edwards, GaryL Gadbury, Prashanth Yelisetti, Jelai Wang, Prinal Trivedi, DavidB Allison, The PowerAtlas: a power and sample size atlas for microarray experimental design and research. BMC Bioinformatics. ,vol. 7, pp. 84- 84 ,(2006) , 10.1186/1471-2105-7-84
J F Modiano, J Domenico, A Szepesi, J J Lucas, E W Gelfand, Differential requirements for interleukin-2 distinguish the expression and activity of the cyclin-dependent kinases Cdk4 and Cdk2 in human T cells. Journal of Biological Chemistry. ,vol. 269, pp. 32972- 32978 ,(1994) , 10.1016/S0021-9258(20)30086-7
J.F. Modiano, R. Kolp, R.J. Lamb, P.C. Nowell, Protein kinase C regulates both production and secretion of interleukin 2. Journal of Biological Chemistry. ,vol. 266, pp. 10552- 10561 ,(1991) , 10.1016/S0021-9258(18)99259-8
Yusuf A. Hannun, David Sindram, Pierre-Alain Clavien, Hannes A. Rüdiger, Michael A. Morse, Alicja Bielawska, Markus Selzner, Induction of apoptotic cell death and prevention of tumor growth by ceramide analogues in metastatic human colon cancer. Cancer Research. ,vol. 61, pp. 1233- 1240 ,(2001)
Nasim Akhtar, Marcia L. Padilla, Erin B. Dickerson, Howard Steinberg, Matthew Breent, Robert Auerbach, Stuart C. Helfand, Interleukin-12 inhibits tumor growth in a novel angiogenesis canine hemangiosarcoma xenograft model. Neoplasia. ,vol. 6, pp. 106- 116 ,(2004) , 10.1593/NEO.03334
A. Jemal, R. Siegel, E. Ward, T. Murray, J. Xu, M. J. Thun, Cancer statistics, 2007. CA: A Cancer Journal for Clinicians. ,vol. 57, pp. 43- 66 ,(2007) , 10.3322/CANJCLIN.57.1.43