Microbiota supplementation with Bifidobacterium and Lactobacillus modifies the preterm infant gut microbiota and metabolome

作者: Cristina Alcon-Giner , Matthew J. Dalby , Shabhonam Caim , Jennifer Ketskemety , Alex Shaw

DOI: 10.1101/698092

关键词:

摘要: Abstract Supplementation with members of the early-life microbiota or ‘probiotics’ is becoming increasingly popular to attempt beneficially manipulate preterm gut microbiota. We performed a large longitudinal study comprising two groups; 101 orally supplemented Bifidobacterium and Lactobacillus (Bif/Lacto) 133 non-supplemented (Control) matched by age, sex, birth-mode, diet. 16S rRNA metataxonomic profiling on stool samples (n = 592) indicated predominance Bifidobacterium, reduction pathobionts in Bif/Lacto group. Metabolic phenotyping found parallel increase fecal acetate lactate group compared Control group, which positively correlated abundance consistent ability strain metabolize human milk oligosaccharides reduced pH. This demonstrates that supplementation can modify microbiome gastrointestinal environment more closely resemble full-term infant.

参考文章(73)
Claire Watkins, Kiera Murphy, Eugene M Dempsey, Carol Anne O’Shea, Brendan Paul Murphy, Paul W O’Toole, R Paul Ross, Catherine Stanton, C Anthony Ryan, Dose-interval study of a dual probiotic in preterm infants Archives of Disease in Childhood-fetal and Neonatal Edition. ,vol. 104, ,(2019) , 10.1136/ARCHDISCHILD-2017-313468
Moran Yassour, Eeva Jason, Larson J. Hogstrom, Timothy D. Arthur, Surya Tripathi, Heli Siljander, Jenni Selvenius, Sami Oikarinen, Heikki Hyöty, Suvi M. Virtanen, Jorma Ilonen, Pamela Ferretti, Edoardo Pasolli, Adrian Tett, Francesco Asnicar, Nicola Segata, Hera Vlamakis, Eric S. Lander, Curtis Huttenhower, Mikael Knip, Ramnik J. Xavier, Strain-Level Analysis of Mother-to-Child Bacterial Transmission during the First Few Months of Life Cell Host & Microbe. ,vol. 24, pp. 146- ,(2018) , 10.1016/J.CHOM.2018.06.007
Aina Gotoh, Toshihiko Katoh, Mikiyasu Sakanaka, Yiwei Ling, Chihaya Yamada, Sadaki Asakuma, Tadasu Urashima, Yusuke Tomabechi, Ayako Katayama-Ikegami, Shin Kurihara, Kenji Yamamoto, Gaku Harata, Fang He, Junko Hirose, Motomitsu Kitaoka, Shujiro Okuda, Takane Katayama, Sharing of human milk oligosaccharides degradants within bifidobacterial communities in faecal cultures supplemented with Bifidobacterium bifidum. Scientific Reports. ,vol. 8, pp. 13958- ,(2018) , 10.1038/S41598-018-32080-3
Veronica Ayechu-Muruzabal, Arthur H. van Stigt, Marko Mank, Linette E. M. Willemsen, Bernd Stahl, Johan Garssen, Belinda van't Land, Diversity of Human Milk Oligosaccharides and Effects on Early Life Immune Development. Frontiers in Pediatrics. ,vol. 6, pp. 239- ,(2018) , 10.3389/FPED.2018.00239
Diana H. Taft, Jinxin Liu, Maria X. Maldonado-Gomez, Samir Akre, M. Nazmul Huda, S. M. Ahmad, Charles B. Stephensen, David A. Mills, Bifidobacterial Dominance of the Gut in Early Life and Acquisition of Antimicrobial Resistance. mSphere. ,vol. 3, ,(2018) , 10.1128/MSPHERE.00441-18
Eirin Esaiassen, Erik Hjerde, Jorunn Pauline Cavanagh, Tanja Pedersen, Jannicke H. Andresen, Siren I. Rettedal, Ragnhild Støen, Britt Nakstad, Nils P. Willassen, Claus Klingenberg, Effects of Probiotic Supplementation on the Gut Microbiota and Antibiotic Resistome Development in Preterm Infants. Frontiers in Pediatrics. ,vol. 6, pp. 347- 347 ,(2018) , 10.3389/FPED.2018.00347
Samuel David Duffield, Paul Clarke, Current use of probiotics to prevent necrotising enterocolitis. Archives of Disease in Childhood-fetal and Neonatal Edition. ,vol. 104, ,(2019) , 10.1136/ARCHDISCHILD-2018-316199
Erica L Plummer, Dieter M Bulach, Gerald L Murray, Susan E Jacobs, Sepehr N Tabrizi, Suzanne M Garland, None, Gut microbiota of preterm infants supplemented with probiotics: sub-study of the ProPrems trial BMC Microbiology. ,vol. 18, pp. 184- ,(2018) , 10.1186/S12866-018-1326-1
Marita Waard, Yanqi Li, Yanna Zhu, Adejumoke I. Ayede, Janet Berrington, Frank H. Bloomfield, Olubunmi O. Busari, Barbara E. Cormack, Nicholas D. Embleton, Johannes B. Goudoever, Gorm Greisen, Zhongqian He, Yan Huang, Xiaodong Li, Hung‐Chih Lin, Jiaping Mei, Paula P. Meier, Chuan Nie, Aloka L. Patel, Christian Ritz, Per T. Sangild, Thomas Skeath, Karen Simmer, Olukemi O. Tongo, Signe S. Uhlenfeldt, Sufen Ye, Xuqiang Ye, Chunyi Zhang, Ping Zhou, Time to Full Enteral Feeding for Very Low-Birth-Weight Infants Varies Markedly Among Hospitals Worldwide But May Not Be Associated With Incidence of Necrotizing Enterocolitis: The NEOMUNE-NeoNutriNet Cohort Study. Journal of Parenteral and Enteral Nutrition. ,vol. 43, pp. 658- 667 ,(2019) , 10.1002/JPEN.1466
Naoki Morita, Eiji Umemoto, Setsuko Fujita, Akio Hayashi, Junichi Kikuta, Ikuo Kimura, Takeshi Haneda, Toshio Imai, Asuka Inoue, Hitomi Mimuro, Yuichi Maeda, Hisako Kayama, Ryu Okumura, Junken Aoki, Nobuhiko Okada, Toshiyuki Kida, Masaru Ishii, Ryusuke Nabeshima, Kiyoshi Takeda, GPR31-dependent dendrite protrusion of intestinal CX3CR1+ cells by bacterial metabolites. Nature. ,vol. 566, pp. 110- 114 ,(2019) , 10.1038/S41586-019-0884-1