Bifidobacterial Dominance of the Gut in Early Life and Acquisition of Antimicrobial Resistance.

作者: Diana H. Taft , Jinxin Liu , Maria X. Maldonado-Gomez , Samir Akre , M. Nazmul Huda

DOI: 10.1128/MSPHERE.00441-18

关键词: BiologyCohortDominance (genetics)CommensalismBifidobacteriumProbioticColonizationMetagenomicsImmunologyAntibiotic resistance

摘要: Bifidobacterium species are important commensals capable of dominating the infant gut microbiome, in part by producing acids that suppress growth other taxa. less prone to possessing antimicrobial resistance (AMR) genes (ARGs) than taxa may colonize infants. Given AMR is a growing public health crisis and ARGs present microbiome humans from early life, this study examines correlation between Bifidobacterium-dominated levels, measured culture-independent metagenomic approach both life as infants become toddlers. In general, dominance associated with significant reduction Bangladeshi cohort, number acquired abundance genes. However, year 2, had no differences related their early-life levels. A generalized linear model including all previously published Swedish cohort found negative association log-transformed total thus confirming relationship levels AMR. cohorts, there was change later-life high-Bifidobacterium but low-Bifidobacterium These results support hypothesis help reduce colonization containing ARGs.IMPORTANCE Infants vulnerable an array infectious diseases, serve reservoir for pathogens, reducing health. This demonstrates high reduced suggests probiotic interventions increase have potential effect not sustained at 2 age infants, underscoring need more detailed studies biogeography timing acquisition.

参考文章(66)
Edward M. Onusko, Keith B. Holten, Appropriate prescribing of oral beta-lactam antibiotics. American Family Physician. ,vol. 62, pp. 611- 620 ,(2000)
P. L. Oh, I. Martínez, Y. Sun, J. Walter, D.A. Peterson, D. F. Mercer, Characterization of the ileal microbiota in rejecting and nonrejecting recipients of small bowel transplants American Journal of Transplantation. ,vol. 12, pp. 753- 762 ,(2012) , 10.1111/J.1600-6143.2011.03860.X
J. Bruce German, Samara L. Freeman, Carlito B. Lebrilla, David A. Mills, Human milk oligosaccharides: evolution, structures and bioselectivity as substrates for intestinal bacteria. Nestle Nutrition workshop series. Paediatric programme. ,vol. 62, pp. 205- 222 ,(2008) , 10.1159/000146322
Marko Kalliomäki, Maria Carmen Collado, Seppo Salminen, Erika Isolauri, Early differences in fecal microbiota composition in children may predict overweight The American Journal of Clinical Nutrition. ,vol. 87, pp. 534- 538 ,(2008) , 10.1093/AJCN/87.3.534
Bing Li, Ying Yang, Liping Ma, Feng Ju, Feng Guo, James M Tiedje, Tong Zhang, Metagenomic and network analysis reveal wide distribution and co-occurrence of environmental antibiotic resistance genes. The ISME Journal. ,vol. 9, pp. 2490- 2502 ,(2015) , 10.1038/ISMEJ.2015.59
M Nazmul Huda, Zachery Lewis, Karen M Kalanetra, Mamunur Rashid, Shaikh M Ahmad, Rubhana Raqib, Firdausi Qadri, Mark A Underwood, David A Mills, Charles B Stephensen, Stool Microbiota and Vaccine Responses of Infants Pediatrics. ,vol. 134, ,(2014) , 10.1542/PEDS.2013-3937
Shinji Fukuda, Hidehiro Toh, Todd D. Taylor, Hiroshi Ohno, Masahira Hattori, Acetate-producing bifidobacteria protect the host from enteropathogenic infection via carbohydrate transporters Gut Microbes. ,vol. 3, pp. 449- 454 ,(2012) , 10.4161/GMIC.21214
K. Molbak, Spread of resistant bacteria and resistance genes from animals to humans--the public health consequences. Journal of Veterinary Medicine Series B-infectious Diseases and Veterinary Public Health. ,vol. 51, pp. 364- 369 ,(2004) , 10.1111/J.1439-0450.2004.00788.X
Angela Marcobal, Mariana Barboza, John W. Froehlich, David E. Block, J. Bruce German, Carlito B. Lebrilla, David A. Mills, Consumption of human milk oligosaccharides by gut-related microbes. Journal of Agricultural and Food Chemistry. ,vol. 58, pp. 5334- 5340 ,(2010) , 10.1021/JF9044205
Shalini Mathur, Rameshwar Singh, Antibiotic resistance in food lactic acid bacteria--a review. International Journal of Food Microbiology. ,vol. 105, pp. 281- 295 ,(2005) , 10.1016/J.IJFOODMICRO.2005.03.008