Clinical metagenomic identification of Balamuthia mandrillaris encephalitis and assembly of the draft genome: the continuing case for reference genome sequencing
作者： Alexander L. Greninger , Kevin Messacar , Thelma Dunnebacke , Samia N. Naccache , Scot Federman
DOI: 10.1186/S13073-015-0235-2
关键词:
摘要: … whole-genome sequence information of reference strains needed for alignment [19]. … of genomic reference sequences by retrospective analysis of a hospital day (HD) 1 sample. …
biomedcentral.com
springer.com
core.ac.uk
genomemedicine.com参考文章(56)
G S Visvesvara, A J Martinez, F L Schuster, G J Leitch, S V Wallace, T K Sawyer, M Anderson, Leptomyxid ameba, a new agent of amebic meningoencephalitis in humans and animals. Journal of Clinical Microbiology. ,vol. 28, pp. 2750- 2756 ,(1990) , 10.1128/JCM.28.12.2750-2756.1990
Michael J. Strong, Guorong Xu, Lisa Morici, Sandra Splinter Bon-Durant, Melody Baddoo, Zhen Lin, Claire Fewell, Christopher M. Taylor, Erik K. Flemington, Microbial Contamination in Next Generation Sequencing: Implications for Sequence-Based Analysis of Clinical Samples PLoS Pathogens. ,vol. 10, pp. e1004437- ,(2014) , 10.1371/JOURNAL.PPAT.1004437
Hideki Kato, Shigehisa Mitake, Hiroyuki Yuasa, Shigemasa Hayashi, Tatsuru Hara, Noriyuki Matsukawa, Successful treatment of granulomatous amoebic encephalitis with combination antimicrobial therapy. Internal Medicine. ,vol. 52, pp. 1977- 1981 ,(2013) , 10.2169/INTERNALMEDICINE.52.0299
FREDERICK L. SCHUSTER, B. JOSEPH GUGLIELMO, GOVINDA S. VISVESVARA, In-vitro activity of miltefosine and voriconazole on clinical isolates of free-living amebas: Balamuthia mandrillaris, Acanthamoeba spp., and Naegleria fowleri. Journal of Eukaryotic Microbiology. ,vol. 53, pp. 121- 126 ,(2006) , 10.1111/J.1550-7408.2005.00082.X
Zhuangli Zheng, Keqing Jiang, Chunhua Huang, Caiying Mei, Richou Han, Cordyceps militaris (Hypocreales: Cordycipitaceae): transcriptional analysis and molecular characterization of cox1 and group I intron with putative LAGLIDADG endonuclease World Journal of Microbiology & Biotechnology. ,vol. 28, pp. 371- 380 ,(2012) , 10.1007/S11274-011-0829-9
Teresa M.R. Regina, Ernesto Picardi, Loredana Lopez, Graziano Pesole, Carla Quagliariello, A novel additional group II intron distinguishes the mitochondrial rps3 gene in gymnosperms. Journal of Molecular Evolution. ,vol. 60, pp. 196- 206 ,(2005) , 10.1007/S00239-004-0098-4
Denise C Zysset-Burri, Norbert Müller, Christian Beuret, Manfred Heller, Nadia Schürch, Bruno Gottstein, Matthias Wittwer, Genome-wide identification of pathogenicity factors of the free-living amoeba Naegleria fowleri BMC Genomics. ,vol. 15, pp. 496- 496 ,(2014) , 10.1186/1471-2164-15-496
Ryan D. Schubert, Michael R. Wilson, A tale of two approaches Current Opinion in Neurology. ,vol. 28, pp. 283- 287 ,(2015) , 10.1097/WCO.0000000000000198
Tracey Allen K Freitas, Po-E Li, Matthew B Scholz, Patrick SG Chain, None, Accurate read-based metagenome characterization using a hierarchical suite of unique signatures. Nucleic Acids Research. ,vol. 43, ,(2015) , 10.1093/NAR/GKV180
ANNA BAKARDJIEV, PARVIN H. AZIMI, NEGAR ASHOURI, DAVID P. ASCHER, DONALD JANNER, FREDERICK L. SCHUSTER, GOVINDA S. VISVESVARA, CAROL GLASER, Amebic encephalitis caused by Balamuthia mandrillaris: report of four cases Pediatric Infectious Disease Journal. ,vol. 22, pp. 447- 452 ,(2003) , 10.1097/01.INF.0000066540.18671.F8