Characterization of 24 porcine (dA-dC)n-(dT-dG)n microsatellites: genotyping of unrelated animals from four breeds and linkage studies

作者: Merete Fredholm , Anne Katrine Winter� , Knud Christensen , Birte Kristensen , Poul Br�uner Nielsen

DOI: 10.1007/BF00417561

关键词:

摘要: Twenty-four PCR primer pairs were designed for the detection of porcine microsatellites. Polymorphism was investigated in 76 unrelated animals from four different breeds: Duroc, Landrace, Hampshire, and Yorkshire. Compared with human microsatellites, a general lower heterozygosity detected; however, each microsatellite significant variation between breeds number alleles seen. Mean found to be significantly higher (P<0.01%) Yorkshire breed than other three breeds. Linkage analyses CEPH linkage packet performed backcross family comprising 45 animals, which 43 had informative meioses. Ten microsatellites could assigned six groups, demonstrating that mapping can carried out great efficiency relatively small animals. Four groups represent Chromosomes (Chrs) 4, 6, 7, 8 respectively, while two are unassigned.

参考文章(26)
J L Weber, P E May, Abundant class of human DNA polymorphisms which can be typed using the polymerase chain reaction American Journal of Human Genetics. ,vol. 44, pp. 388- 396 ,(1989)
J Ott, G M Lathrop, J M Lalouel, C Julier, Multilocus linkage analysis in humans: detection of linkage and estimation of recombination. American Journal of Human Genetics. ,vol. 37, pp. 482- 498 ,(1985)
D Botstein, R W Davis, R L White, M Skolnick, Construction of a genetic linkage map in man using restriction fragment length polymorphisms. American Journal of Human Genetics. ,vol. 32, pp. 314- 331 ,(1980)
James L. Weber, Informativeness of human (dC-dA)n.(dG-dT)n polymorphisms. Genomics. ,vol. 7, pp. 524- 530 ,(1990) , 10.1016/0888-7543(90)90195-Z
L. Marklund, M. Johansson, U. Gustafsson, L. Andersson, A. K. Winterö, M. Fredholm, P. D. Thomsen, A linkage group on pig chromosome 4 comprising the loci for blood group L, GBA, ATP1B1 and three microsatellites. Animal Genetics. ,vol. 24, pp. 333- 338 ,(2009) , 10.1111/J.1365-2052.1993.TB00336.X
E. A. Ostrander, P. M. Jong, J. Rine, G. Duyk, Construction of small-insert genomic DNA libraries highly enriched for microsatellite repeat sequences. Proceedings of the National Academy of Sciences of the United States of America. ,vol. 89, pp. 3419- 3423 ,(1992) , 10.1073/PNAS.89.8.3419
François Corne´lis, Lara Hashimoto, Jason Loveridge, Angela MacCarthy, Veronica Buckle, Ce´cile Julier, John Bell, Identification of a CA repeat at the TCRA locus using yeast artificial chromosomes: a general method for generating highly polymorphic markers at chosen loci. Genomics. ,vol. 13, pp. 820- 825 ,(1992) , 10.1016/0888-7543(92)90159-P
Birte Kristensen, Merete Philipsen, S. Lazary, Christine Renard, A. L. Weck, The swine histo compatibility system SLA: serological studies in the common Swiss and Danish swine breeds Animal Blood Groups and Biochemical Genetics. ,vol. 16, pp. 109- 124 ,(2009) , 10.1111/J.1365-2052.1985.TB01459.X