Genetic structure of pig breeds from Korea and China using microsatellite loci analysis.

作者: T. H. Kim , K. S. Kim , B. H. Choi , D. H. Yoon , G. W. Jang

DOI: 10.2527/2005.83102255X

关键词: Genetic divergenceWuzhishan pigGenetic structureGenetic variationKorean NativePopulationGenetic distanceBreedBiologyVeterinary medicine

摘要: To understand molecular genetic characteristics of Korean pigs, the relationships nine pig breeds including two pigs (Korean native and wild pig), three Chinese (Min pig, Xiang Wuzhishan four European (Berkshire, Duroc, Landrace, Yorkshire) were characterized from a 16-microsatellite loci analysis. The mean heterozygosity within ranged 0.494 to 0.703. Across multiple loci, significant deviation Hardy-Weinberg equilibrium was observed in most breeds, except for pig). This direction heterozygote deficit. population 36 144 significantly deviated (P < 0.05) equilibrium. FST, measure divergence among subpopulations, all indicated that 26.1% total variation could be attributed breed difference. Relationship trees based on Nei's DA distance scatter diagram principal component analysis consistently displayed pronounced differentiation pig. Individual assignment test using Bayesian method showed 100% success assigning individual into their correct origin exclusion alternative reference populations at P 0.001. These findings indicate has been experiencing progressive interbreeding with Western after originating North China black coat color. Considering close relationship such as Berkshire our can used valuable information preservation further improvement

参考文章(43)
C Lemus-Flores, R Ulloa-Arvizu, M Ramos-Kuri, F J Estrada, R A Alonso, Genetic analysis of Mexican hairless pig populations. Journal of Animal Science. ,vol. 79, pp. 3021- 3026 ,(2001) , 10.2527/2001.79123021X
Masatoshi Nei, Sudhir Kumar, None, Molecular Evolution and Phylogenetics ,(2000)
S.-J. Li, S.-H. Yang, S.-H. Zhao, B. Fan, M. Yu, H.-S. Wang, M.-H. Li, B. Liu, T.-A. Xiong, K. Li, Genetic diversity analyses of 10 indigenous Chinese pig populations based on 20 microsatellites. Journal of Animal Science. ,vol. 82, pp. 368- 374 ,(2004) , 10.2527/2004.822368X
M. F. Rothschild, G. F. Jones, A. Ruvinsky, Genetic aspects of domestication, common breeds and their origin. The genetics of the pig.. pp. 17- 50 ,(1998)
James F. Crow, Motoo Kimura, THE NUMBER OF ALLELES THAT CAN BE MAINTAINED IN A FINITE POPULATION. Genetics. ,vol. 49, pp. 725- 738 ,(1964) , 10.1093/GENETICS/49.4.725
Jean-Marie Cornuet, Sylvain Piry, Gordon Luikart, Arnaud Estoup, Michel Solignac, None, New Methods Employing Multilocus Genotypes to Select or Exclude Populations as Origins of Individuals Genetics. ,vol. 153, pp. 1989- 2000 ,(1999) , 10.1093/GENETICS/153.4.1989
John W. Keele, Gary A. Rohrer, Craig W. Beattie, Leeson J. Alexander, Tim P. Smith, A microsatellite linkage map of the porcine genome. Genetics. ,vol. 136, pp. 231- 245 ,(1994) , 10.1093/GENETICS/136.1.231
B P Chowdhary, M Fredholm, I Gustavsson, M Johansson, L Marklund, H Ellegren, L Andersson, A primary linkage map of the porcine genome reveals a low rate of genetic recombination. Genetics. ,vol. 137, pp. 1089- 1100 ,(1994) , 10.1093/GENETICS/137.4.1089
Merete Fredholm, Anne Katrine Winter�, Knud Christensen, Birte Kristensen, Poul Br�uner Nielsen, William Davies, Alan Archibald, Characterization of 24 porcine (dA-dC)n-(dT-dG)n microsatellites: genotyping of unrelated animals from four breeds and linkage studies Mammalian Genome. ,vol. 4, pp. 187- 192 ,(1993) , 10.1007/BF00417561