Extrinsic Noise Suppression in Micro RNA Mediated Incoherent Feedforward Loops

作者: Alberto Carignano , Sumit Mukherjee , Abhyudai Singh , Georg Seelig

DOI: 10.1101/422394

关键词:

摘要: MicroRNA mediated incoherent feed forward loops (IFFLs) are recurrent network motifs in mammalian cells and have been a topic of study for their noise rejection and buffering …

参考文章(34)
Anagha Joshi, Yvonne Beck, Tom Michoel, Post-transcriptional regulatory networks play a key role in noise reduction that is conserved from micro-organisms to mammals international conference on systems. ,vol. 279, pp. 3501- 3512 ,(2012) , 10.1111/J.1742-4658.2012.08571.X
Mohammad Soltani, Cesar Augusto Vargas-Garcia, Abhyudai Singh, Conditional Moment Closure Schemes for Studying Stochastic Dynamics of Genetic Circuits IEEE Transactions on Biomedical Circuits and Systems. ,vol. 9, pp. 518- 526 ,(2015) , 10.1109/TBCAS.2015.2453158
Eszter Lakatos, Angelique Ale, Paul D. W. Kirk, Michael P. H. Stumpf, Multivariate moment closure techniques for stochastic kinetic models Journal of Chemical Physics. ,vol. 143, pp. 094107- 094107 ,(2015) , 10.1063/1.4929837
Stefan Legewie, Dennis Dienst, Annegret Wilde, Hanspeter Herzel, Ilka M. Axmann, Small RNAs Establish Delays and Temporal Thresholds in Gene Expression Biophysical Journal. ,vol. 95, pp. 3232- 3238 ,(2008) , 10.1529/BIOPHYSJ.108.133819
Ryan J Bloom, Sally M Winkler, Christina D Smolke, A quantitative framework for the forward design of synthetic miRNA circuits Nature Methods. ,vol. 11, pp. 1147- 1153 ,(2014) , 10.1038/NMETH.3100
Chang Hyeong Lee, Kyeong-Hun Kim, Pilwon Kim, A moment closure method for stochastic reaction networks Journal of Chemical Physics. ,vol. 130, pp. 134107- 134107 ,(2009) , 10.1063/1.3103264
H. Dill, B. Linder, A. Fehr, U. Fischer, Intronic miR-26b controls neuronal differentiation by repressing its host transcript, ctdsp2 Genes & Development. ,vol. 26, pp. 25- 30 ,(2012) , 10.1101/GAD.177774.111
Michael W. Chevalier, Hana El-Samad, A data-integrated method for analyzing stochastic biochemical networks Journal of Chemical Physics. ,vol. 135, pp. 214110- 214110 ,(2011) , 10.1063/1.3664126
Jörn M. Schmiedel, Sandy L. Klemm, Yannan Zheng, Apratim Sahay, Nils Blüthgen, Debora S. Marks, Alexander van Oudenaarden, MicroRNA control of protein expression noise Science. ,vol. 348, pp. 128- 132 ,(2015) , 10.1126/SCIENCE.AAA1738
Alexander Marson, Stuart S. Levine, Megan F. Cole, Garrett M. Frampton, Tobias Brambrink, Sarah Johnstone, Matthew G. Guenther, Wendy K. Johnston, Marius Wernig, Jamie Newman, J. Mauro Calabrese, Lucas M. Dennis, Thomas L. Volkert, Sumeet Gupta, Jennifer Love, Nancy Hannett, Phillip A. Sharp, David P. Bartel, Rudolf Jaenisch, Richard A. Young, Connecting microrna genes to the core transcriptional regulatory circuitry of embryonic stem cells Cell. ,vol. 134, pp. 521- 533 ,(2009) , 10.1016/J.CELL.2008.07.020