Summary of BARD1 Mutations and Precise Estimation of Breast and Ovarian Cancer Risks Associated with the Mutations.

作者: Malwina Suszynska , Piotr Kozlowski

DOI: 10.3390/GENES11070798

关键词:

摘要: Over the last two decades, numerous BARD1 mutations/pathogenic variants (PVs) have been found in patients with breast cancer (BC) and ovarian (OC). However, their role BC OC susceptibility remains controversial, strong evidence-based guidelines for carriers are not yet available. Herein, we present a comprehensive catalog of PVs identified large cumulative cohorts ~48,700 ~20,800 cases (retrieved from 123 studies examining whole coding sequence BARD1). Using these resources, compared frequency ~134,100 controls gnomAD database estimated effect on risks. The analysis revealed that is moderate-risk gene (odds ratio (OR) = 2.90, 95% CIs:2.25-3.75, p < 0.0001) but an risk (OR 1.36, CIs:0.87-2.11, 0.1733). In addition, mutational spectrum outlined this study allowed us to determine recurrent evaluate variant-specific most frequent PVs. conclusion, precise estimates improve understanding predisposition support need diagnostic testing patients.

参考文章(154)
Jun Li, Huong Meeks, Bing-Jian Feng, Sue Healey, Heather Thorne, Igor Makunin, Jonathan Ellis, Ian Campbell, Melissa Southey, Gillian Mitchell, David Clouston, Judy Kirk, David Goldgar, Georgia Chenevix-Trench, , Targeted massively parallel sequencing of a panel of putative breast cancer susceptibility genes in a large cohort of multiple-case breast and ovarian cancer families Journal of Medical Genetics. ,vol. 53, pp. 34- 42 ,(2016) , 10.1136/JMEDGENET-2015-103452
Barbara M. Norquist, Maria I. Harrell, Mark F. Brady, Tom Walsh, Ming K. Lee, Suleyman Gulsuner, Sarah S. Bernards, Silvia Casadei, Qian Yi, Robert A. Burger, John K. Chan, Susan A. Davidson, Robert S. Mannel, Paul A. DiSilvestro, Heather A. Lankes, Nilsa C. Ramirez, Mary Claire King, Elizabeth M. Swisher, Michael J. Birrer, Inherited Mutations in Women With Ovarian Carcinoma JAMA Oncology. ,vol. 2, pp. 482- 490 ,(2016) , 10.1001/JAMAONCOL.2015.5495
Charles Lu, Mingchao Xie, Michael C. Wendl, Jiayin Wang, Michael D. McLellan, Mark D. M. Leiserson, Kuan-lin Huang, Matthew A. Wyczalkowski, Reyka Jayasinghe, Tapahsama Banerjee, Jie Ning, Piyush Tripathi, Qunyuan Zhang, Beifang Niu, Kai Ye, Heather K. Schmidt, Robert S. Fulton, Joshua F. McMichael, Prag Batra, Cyriac Kandoth, Maheetha Bharadwaj, Daniel C. Koboldt, Christopher A. Miller, Krishna L. Kanchi, James M. Eldred, David E. Larson, John S. Welch, Ming You, Bradley A. Ozenberger, Ramaswamy Govindan, Matthew J. Walter, Matthew J. Ellis, Elaine R. Mardis, Timothy A. Graubert, John F. Dipersio, Timothy J. Ley, Richard K. Wilson, Paul J. Goodfellow, Benjamin J. Raphael, Feng Chen, Kimberly J. Johnson, Jeffrey D. Parvin, Li Ding, Patterns and functional implications of rare germline variants across 12 cancer types Nature Communications. ,vol. 6, pp. 10086- 10086 ,(2015) , 10.1038/NCOMMS10086
P.S. Ng, W.X. Wen, M.Z.H. Fadlullah, S.Y. Yoon, S.Y. Lee, M.K. Thong, C.H. Yip, N.A. Mohd Taib, S.H. Teo, Identification of germline alterations in breast cancer predisposition genes among Malaysian breast cancer patients using panel testing. Clinical Genetics. ,vol. 90, pp. 315- 323 ,(2016) , 10.1111/CGE.12735
Monkol Lek, Konrad J Karczewski, Eric V Minikel, Kaitlin E Samocha, Eric Banks, Timothy Fennell, Anne H O’Donnell-Luria, James S Ware, Andrew J Hill, Beryl B Cummings, Taru Tukiainen, Daniel P Birnbaum, Jack A Kosmicki, Laramie E Duncan, Karol Estrada, Fengmei Zhao, James Zou, Emma Pierce-Hoffman, Joanne Berghout, David N Cooper, Nicole Deflaux, Mark DePristo, Ron Do, Jason Flannick, Menachem Fromer, Laura Gauthier, Jackie Goldstein, Namrata Gupta, Daniel Howrigan, Adam Kiezun, Mitja I Kurki, Ami Levy Moonshine, Pradeep Natarajan, Lorena Orozco, Gina M Peloso, Ryan Poplin, Manuel A Rivas, Valentin Ruano-Rubio, Samuel A Rose, Douglas M Ruderfer, Khalid Shakir, Peter D Stenson, Christine Stevens, Brett P Thomas, Grace Tiao, Maria T Tusie-Luna, Ben Weisburd, Hong-Hee Won, Dongmei Yu, David M Altshuler, Diego Ardissino, Michael Boehnke, John Danesh, Stacey Donnelly, Roberto Elosua, Jose C Florez, Stacey B Gabriel, Gad Getz, Stephen J Glatt, Christina M Hultman, Sekar Kathiresan, Markku Laakso, Steven McCarroll, Mark I McCarthy, Dermot McGovern, Ruth McPherson, Benjamin M Neale, Aarno Palotie, Shaun M Purcell, Danish Saleheen, Jeremiah M Scharf, Pamela Sklar, Patrick F Sullivan, Jaakko Tuomilehto, Ming T Tsuang, Hugh C Watkins, James G Wilson, Mark J Daly, Daniel G MacArthur, Exome Aggregation Consortium, Analysis of protein-coding genetic variation in 60,706 humans Nature. ,vol. 536, pp. 285- 291 ,(2016) , 10.1038/NATURE19057
Lisa R. Susswein, Megan L. Marshall, Rachel Nusbaum, Kristen J. Vogel Postula, Scott M. Weissman, Lauren Yackowski, Erica M. Vaccari, Jeffrey Bissonnette, Jessica K. Booker, M. Laura Cremona, Federica Gibellini, Patricia D. Murphy, Daniel E. Pineda-Alvarez, Guido D. Pollevick, Zhixiong Xu, Gabi Richard, Sherri Bale, Rachel T. Klein, Kathleen S. Hruska, Wendy K. Chung, Pathogenic and likely pathogenic variant prevalence among the first 10,000 patients referred for next-generation cancer panel testing. Genetics in Medicine. ,vol. 18, pp. 823- 832 ,(2016) , 10.1038/GIM.2015.166
Po-Han Lin, Wen-Hung Kuo, Ai-Chu Huang, Yen-Shen Lu, Ching-Hung Lin, Sung-Hsin Kuo, Ming-Yang Wang, Chun-Yu Liu, FT Cheng, Ming-Hsin Yeh, Huei-Ying Li, Yu-Hsuan Yang, Yu-Hua Hsu, Sheng-Chih Fan, Long-Yuan Li, Sung-Liang Yu, King-Jen Chang, Pei-Lung Chen, Yen-Hsuan Ni, Chiun-Sheng Huang, None, Multiple gene sequencing for risk assessment in patients with early-onset or familial breast cancer Oncotarget. ,vol. 7, pp. 8310- 8320 ,(2016) , 10.18632/ONCOTARGET.7027
Ella R. Thompson, Simone M. Rowley, Na Li, Simone McInerny, Lisa Devereux, Michelle W. Wong-Brown, Alison H. Trainer, Gillian Mitchell, Rodney J. Scott, Paul A. James, Ian G. Campbell, Panel Testing for Familial Breast Cancer: Calibrating the Tension Between Research and Clinical Care Journal of Clinical Oncology. ,vol. 34, pp. 1455- 1459 ,(2016) , 10.1200/JCO.2015.63.7454
Thangarajan Rajkumar, Balaiah Meenakumari, Samson Mani, Veluswami Sridevi, Shirley Sundersingh, Targeted Resequencing of 30 Genes Improves the Detection of Deleterious Mutations in South Indian Women with Breast and/or Ovarian Cancers Asian Pacific Journal of Cancer Prevention. ,vol. 16, pp. 5211- 5217 ,(2015) , 10.7314/APJCP.2015.16.13.5211
Nadine Tung, Nancy U. Lin, John Kidd, Brian A. Allen, Nanda Singh, Richard J. Wenstrup, Anne-Renee Hartman, Eric P. Winer, Judy E. Garber, Frequency of Germline Mutations in 25 Cancer Susceptibility Genes in a Sequential Series of Patients With Breast Cancer Journal of Clinical Oncology. ,vol. 34, pp. 1460- 1468 ,(2016) , 10.1200/JCO.2015.65.0747