Deoxyribonucleic Acid Homology in Bacterial Taxonomy: Effect of Incubation Temperature on Reaction Specificity

作者: John L. Johnson , Erling J. Ordal

DOI: 10.1128/JB.95.3.893-900.1968

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摘要: Parameters affecting deoxyribonucleic acid duplex (DNA-DNA) formation on membrane filters were evaluated. The reference strains used Cytophaga succinicans strain 8, which has a guanine plus cytosine (GC) content of 38%, and Myxococcus xanthus FB, GC 70%. Both organisms are gliding bacteria classified among the myxobacteria. Among parameters evaluated, incubation temperature during was found to be most important in terms physical nature reaction product. When an 25 C below melting point (Tm) native DNA used, homologous duplexes exhibited thermal stability similar that DNA. At 35 Tm, considerable proportion much lower stability; at 40 stability. Similar low also formed between molecules from morphologically nutritionally diverse organisms, provided percentages preparations similar. Competition unlabeled labeled fragments for binding sites immobilized greatly influenced by temperature. Heterologous DNA-DNA complexes stabilities correlated with measurements homology experiments involving competition. In addition, difference heterologous (ΔT′m) may provide measure divergence nucleotide sequences.

参考文章(16)
Richard L. Anderson, Erling J. Ordal, CYTOPHAGA SUCCINICANS SP. N., A FACULTATIVELY ANAEROBIC, AQUATIC MYXOBACTERIUM Journal of Bacteriology. ,vol. 81, pp. 130- 138 ,(1961) , 10.1128/JB.81.1.130-138.1961
Gary T. Heberlein, J. De Ley, R. Tijtgat, Deoxyribonucleic Acid Homology and Taxonomy of Agrobacterium, Rhizobium, and Chromobacterium Journal of Bacteriology. ,vol. 94, pp. 116- 124 ,(1967) , 10.1128/JB.94.1.116-124.1967
J. C. Ensign, R. S. Wolfe, Lysis of Bacterial Cell Walls by an Enzyme Isolated from a Myxobacter Journal of Bacteriology. ,vol. 90, pp. 395- 402 ,(1965) , 10.1128/JB.90.2.395-402.1965
P. H. A. Sneath, Some thoughts on bacterial classification. Microbiology. ,vol. 17, pp. 184- 200 ,(1957) , 10.1099/00221287-17-1-184
B. J. McCarthy, E. T. Bolton, An approach to the measurement of genetic relatedness among organisms. Proceedings of the National Academy of Sciences of the United States of America. ,vol. 50, pp. 156- 164 ,(1963) , 10.1073/PNAS.50.1.156
David T. Denhardt, A membrane-filter technique for the detection of complementary DNA Biochemical and Biophysical Research Communications. ,vol. 23, pp. 641- 646 ,(1966) , 10.1016/0006-291X(66)90447-5
J. Marmur, A procedure for the isolation of deoxyribonucleic acid from micro-organisms Journal of Molecular Biology. ,vol. 3, pp. 208- IN1 ,(1961) , 10.1016/S0022-2836(61)80047-8
Martin Dworkin, NUTRITIONAL REQUIREMENTS FOR VEGETATIVE GROWTH OF MYXOCOCCUS XANTHUS Journal of Bacteriology. ,vol. 84, pp. 250- 257 ,(1962) , 10.1128/JB.84.2.250-257.1962
Julius Marmur, Paul Doty, Thermal renaturation of deoxyribonucleic acids Journal of Molecular Biology. ,vol. 3, pp. 585- 594 ,(1961) , 10.1016/S0022-2836(61)80023-5
B. H. Hoyer, B. J. McCarthy, E. T. Bolton, A Molecular Approach in Systematics of Higher Organisms Science. ,vol. 144, pp. 959- 967 ,(1964) , 10.1126/SCIENCE.144.3621.959