Accurate determination of Peptide Phosphorylation Stoichiometry Via Automated Diagonal Capillary Electrophoresis Coupled with Mass Spectrometry – Proof of Principle

作者: Si Mou , Liangliang Sun , Norman J. Dovichi

DOI: 10.1021/AC402858A

关键词:

摘要: While reversible protein phosphorylation plays an important role in many cellular processes, simple and reliable measurement of the stoichiometry can be challenging. This is confounded by differences ionization efficiency phosphorylated unphosphorylated sites during analysis mass spectrometry. Here, we demonstrate diagonal capillary electrophoresis–mass spectrometry for accurate determination this stoichiometry. Diagonal electrophoresis a two-dimensional separation method that incorporates immobilized alkaline phosphatase microreactor at distal end first employs identical electrophoretic modes both dimensions. The dimension used to separate mixture forms peptide. Fractions are parked reactor where they undergo complete dephosphorylation. products then periodically transferred second analyzed spec...

参考文章(32)
Philip Cohen, The origins of protein phosphorylation Nature Cell Biology. ,vol. 4, ,(2002) , 10.1038/NCB0502-E127
Ryan J. Flaherty, Bonnie J. Huge, Spencer M. Bruce, Oluwatosin O. Dada, Norman J. Dovichi, Nicked-sleeve interface for two-dimensional capillary electrophoresis Analyst. ,vol. 138, pp. 3621- 3625 ,(2013) , 10.1039/C3AN00284E
Liangliang Sun, Guijie Zhu, Yihan Li, Roza Wojcik, Ping Yang, Norman J. Dovichi, CZE-ESI-MS/MS system for analysis of subnanogram amounts of tryptic digests of a cellular homogenate. Proteomics. ,vol. 12, pp. 3013- 3019 ,(2012) , 10.1002/PMIC.201200100
Yihan Li, Roza Wojcik, Norman J. Dovichi, Matthew M. Champion, Quantitative Multiple Reaction Monitoring of Peptide Abundance Introduced via a Capillary Zone Electrophoresis–Electrospray Interface Analytical Chemistry. ,vol. 84, pp. 6116- 6121 ,(2012) , 10.1021/AC300926H
Ronghu Wu, Noah Dephoure, Wilhelm Haas, Edward L. Huttlin, Bo Zhai, Mathew E. Sowa, Steven P. Gygi, Correct Interpretation of Comprehensive Phosphorylation Dynamics Requires Normalization by Protein Expression Changes Molecular & Cellular Proteomics. ,vol. 10, ,(2011) , 10.1074/MCP.M111.009654
Andrew Thompson, Jürgen Schäfer, Karsten Kuhn, Stefan Kienle, Josef Schwarz, Günter Schmidt, Thomas Neumann, Christian Hamon, Tandem Mass Tags: A Novel Quantification Strategy for Comparative Analysis of Complex Protein Mixtures by MS/MS Analytical Chemistry. ,vol. 75, pp. 1895- 1904 ,(2003) , 10.1021/AC0262560
Anders K. Palm, Milos V. Novotny, Analytical characterization of a facile porous polymer monolithic trypsin microreactor enabling peptide mass mapping using mass spectrometry. Rapid Communications in Mass Spectrometry. ,vol. 18, pp. 1374- 1382 ,(2004) , 10.1002/RCM.1500
Igor P Chernov, Kira A Timchenko, Sergey B Akopov, Lev G Nikolaev, Eugene D Sverdlov, None, Identification of tissue-specific DNA-protein binding sites by means of two-dimensional electrophoretic mobility shift assay display. Analytical Biochemistry. ,vol. 364, pp. 60- 66 ,(2007) , 10.1016/J.AB.2007.01.040
Roza Wojcik, Michael Vannatta, Norman J. Dovichi, Automated enzyme-based diagonal capillary electrophoresis: application to phosphopeptide characterization. Analytical Chemistry. ,vol. 82, pp. 1564- 1567 ,(2010) , 10.1021/AC100029U
Regine M. Schoenherr, Mingliang Ye, Michael Vannatta, Norman J. Dovichi, CE-Microreactor-CE-MS/MS for Protein Analysis Analytical Chemistry. ,vol. 79, pp. 2230- 2238 ,(2007) , 10.1021/AC061638H