Proteomic analysis of Chromobacterium violaceum and its adaptability to stress

作者: Diogo Castro , Isabelle Bezerra Cordeiro , Paula Taquita , Marcos Nogueira Eberlin , Jerusa Simone Garcia

DOI: 10.1186/S12866-015-0606-2

关键词:

摘要: Chromobacterium violaceum (C. violaceum) occurs abundantly in a variety of ecosystems, including ecosystems that place the bacterium under stress. This study assessed adaptability C. by submitting it to nutritional and pH stresses then analyzing protein expression using bi-dimensional electrophoresis (2-DE) Maldi mass spectrometry. grew best neutral, nutrient-rich medium (reference conditions); however, total recovered from stressed bacteria cultures was always higher than our reference culture. The diversity proteins expressed (repressed number identifiable 2-DE spots) seen be highest cultures, suggesting stress reduces overall range violaceum. Database comparisons allowed 43 55 spots subjected spectrometry characterized as containing single protein. Stress-related changes were noted for related previously bacterial proteins: DnaK, GroEL-2, Rhs, EF-Tu, EF-P; MCP, homogentisate 1,2-dioxygenase, Arginine deiminase ATP synthase β-subunit well ribosomal subunits L1, L3, L5 L6. ability adapt its cellular mechanics sub-optimal growth production conditions illustrated regulation subunits. With exception subunit which plays role folding maybe therefore more useful stressful conditions, all other have reduced cultures. Curiously, violeaceum also observed lose their violet color stress, suggests violacein pigment biosynthetic pathway is affected Analysis proteomic signatures indicates nutrient-starvation can cause receptors, transporters, involved with pathways, molecule recycling, energy production. Our findings complement recent publication genome sequence could help future commercial exploitation violeaceum.

参考文章(54)
Edson Rondinelli, Turán P. Ürményi, Júlia R. Araripe, Rosane Silva, Gene expression in Chromobacterium violaceum Genetics and Molecular Research. ,vol. 3, pp. 64- 75 ,(2004)
J Spence, A Cegielska, C Georgopoulos, Role of Escherichia coli heat shock proteins DnaK and HtpG (C62.5) in response to nutritional deprivation. Journal of Bacteriology. ,vol. 172, pp. 7157- 7166 ,(1990) , 10.1128/JB.172.12.7157-7166.1990
Divina das Dores de Paula Cardoso, Maristela Pereira, Célia Maria de Almeida Soares, Renata Bastos Ascenço Soares, Juliana Alves Parente, Luiz Artur Mendes Bataus, Chemotaxis and flagellar genes of Chromobacterium violaceum. Genetics and Molecular Research. ,vol. 3, pp. 92- 101 ,(2004)
The complete genome sequence of Chromobacterium violaceum reveals remarkable and exploitable bacterial adaptability Proceedings of the National Academy of Sciences of the United States of America. ,vol. 100, pp. 11660- 11665 ,(2003) , 10.1073/PNAS.1832124100
C C Young, R W Bernlohr, Elongation factor Tu is methylated in response to nutrient deprivation in Escherichia coli. Journal of Bacteriology. ,vol. 173, pp. 3096- 3100 ,(1991) , 10.1128/JB.173.10.3096-3100.1991
Hongyun Wang, George Oster, Energy transduction in the F1 motor of ATP synthase. Nature. ,vol. 396, pp. 279- 282 ,(1998) , 10.1038/24409
A Casiano-Colón, R E Marquis, Role of the arginine deiminase system in protecting oral bacteria and an enzymatic basis for acid tolerance. Applied and Environmental Microbiology. ,vol. 54, pp. 1318- 1324 ,(1988) , 10.1128/AEM.54.6.1318-1324.1988
William C. Ratcliff, Supriya V. Kadam, Robert Ford Denison, Poly-3-hydroxybutyrate (PHB) supports survival and reproduction in starving rhizobia. FEMS Microbiology Ecology. ,vol. 65, pp. 391- 399 ,(2008) , 10.1111/J.1574-6941.2008.00544.X
Mary H. Efthimion, William A. Corpe, Effect of cold temperatures on the viability of Chromobacterium violaceum. Applied and Environmental Microbiology. ,vol. 17, pp. 169- 175 ,(1969) , 10.1128/AM.17.1.169-175.1969