Functional Characterization of the Mannitol Promoter of Pseudomonas fluorescens DSM 50106 and Its Application for a Mannitol-Inducible Expression System for Pseudomonas putida KT2440

作者: Jana Hoffmann , Josef Altenbuchner

DOI: 10.1371/JOURNAL.PONE.0133248

关键词:

摘要: A new pBBR1MCS-2-derived vector containing the Pseudomonas fluorescens DSM10506 mannitol promoter PmtlE and mtlR encoding its AraC/XylS type transcriptional activator was constructed optimized for low basal expression. Mannitol, arabitol, glucitol-inducible gene expression demonstrated with putida eGFP as reporter gene. The applied functional characterization of PmtlE. Identification DNA binding site MtlR achieved by in vivo measurement wild mutants thereof. Moreover, purified detailed vitro investigations using electrophoretic mobility shift assays DNaseI footprinting experiments. obtained data suggest that binds to a dimer. proposed is AGTGC-N5-AGTAT-N7-AGTGC-N5-AGGAT. transcription activation mechanism includes two sites different affinities, strong upstream weaker downstream site. presence weak shown be necessary sustain mannitol-inducibility Two possible functions are discussed; effector might stabilize second monomer half or promote inducing conformational change regulator influences contact RNA polymerase.

参考文章(60)
Jonathan J. Dennis, Pamela A. Sokol, Electrotransformation of Pseudomonas Methods of Molecular Biology. ,vol. 47, pp. 125- 133 ,(1995) , 10.1385/0-89603-310-4:125
George M. Garrity, Julia A. Bell, Timothy Lilburn, Pseudomonadales Orla-Jensen 1921, 270AL Springer, Boston, MA. pp. 323- 442 ,(2005) , 10.1007/0-387-28022-7_9
J.H. Carra, R.F. Schleif, Variation of half‐site organization and DNA looping by AraC protein. The EMBO Journal. ,vol. 12, pp. 35- 44 ,(1993) , 10.1002/J.1460-2075.1993.TB05629.X
in chief George M. Garrity, Bergey's Manual of Systematic Bacteriology ,(1986)
J L Wylie, E A Worobec, The OprB porin plays a central role in carbohydrate uptake in Pseudomonas aeruginosa. Journal of Bacteriology. ,vol. 177, pp. 3021- 3026 ,(1995) , 10.1128/JB.177.11.3021-3026.1995
Tom Ellenberger, Hyock Joo Kwon, Marjon H.J. Bennik, Bruce Demple, Crystal structure of the Escherichia coli Rob transcription factor in complex with DNA Nature Structural & Molecular Biology. ,vol. 7, pp. 424- 430 ,(2000) , 10.1038/75213
Susan M. Egan, Robert F. Schleif, DNA-dependent renaturation of an insoluble DNA binding protein. Identification of the RhaS binding site at rhaBAD. Journal of Molecular Biology. ,vol. 243, pp. 821- 829 ,(1994) , 10.1006/JMBI.1994.1684
Danilo Pérez-Pantoja, Juhyun Kim, Rafael Silva-Rocha, Víctor de Lorenzo, The differential response of the Pben promoter of Pseudomonas putida mt-2 to BenR and XylS prevents metabolic conflicts in m-xylene biodegradation Environmental Microbiology. ,vol. 17, pp. 64- 75 ,(2015) , 10.1111/1462-2920.12443
N Mermod, J L Ramos, P R Lehrbach, K N Timmis, Vector for regulated expression of cloned genes in a wide range of gram-negative bacteria. Journal of Bacteriology. ,vol. 167, pp. 447- 454 ,(1986) , 10.1128/JB.167.2.447-454.1986