Application of High-Throughput Sequencing Technologies in Native Forest Tree Species in Argentina: Implications for Breeding

作者: Susana L. Torales , Verónica El Mujtar , Susana Marcucci-Poltri , Florencia Pomponio , Carolina Soliani

DOI: 10.1007/978-3-030-56462-9_17

关键词:

摘要: High-throughput sequencing (HTS) technologies became a powerful approach to generate genomic resources in non-model tree species and assist breeding programs. These are being used native forest trees of Argentina this chapter summarizes the state-of-the-art knowledge. A brief description HTS is followed by general applications on for development massive genotyping. Genomic strategies accelerate includes genome-wide association studies selection. were applied Argentina’s transcriptome genome Nothofagus Prosopis alba Cedrela balansae. Ongoing projects include Austrocedrus chilensis, Handroanthus impetiginosus Cordia trichotoma; chilensis alpina N. obliqua under drought stress conditions. Current future genetic implications discussed.

参考文章(110)
Geneviève J. Parent, Elie Raherison, Juliana Sena, John J. MacKay, Forest Tree Genomics: Review of Progress Advances in Botanical Research. ,vol. 74, pp. 39- 92 ,(2015) , 10.1016/BS.ABR.2015.05.004
Edinardo Fagner Ferreira Matias, Erivania Ferreira Alves, Maria Karollyna do Nascimento Silva, Victoria Regina de Alencar Carvalho, Henrique Douglas Melo Coutinho, José Galberto Martins da Costa, The genus Cordia: botanists, ethno, chemical and pharmacological aspects Revista Brasileira De Farmacognosia-brazilian Journal of Pharmacognosy. ,vol. 25, pp. 542- 552 ,(2015) , 10.1016/J.BJP.2015.05.012
María F Álvarez, Teresa Mosquera, Matthew W Blair, None, The Use of Association Genetics Approaches in Plant Breeding Plant Breeding Reviews. pp. 17- 68 ,(2014) , 10.1002/9781118916865.CH02
Jeffry M. Thornsberry, Major M. Goodman, John Doebley, Stephen Kresovich, Dahlia Nielsen, Edward S. Buckler, Dwarf8 polymorphisms associate with variation in flowering time Nature Genetics. ,vol. 28, pp. 286- 289 ,(2001) , 10.1038/90135
Casey S. Greene, Jie Tan, Matthew Ung, Jason H. Moore, Chao Cheng, Big Data Bioinformatics Journal of Cellular Physiology. ,vol. 229, pp. 1896- 1900 ,(2014) , 10.1002/JCP.24662
Jason A. Reuter, Damek V. Spacek, Michael P. Snyder, High-Throughput Sequencing Technologies Molecular Cell. ,vol. 58, pp. 586- 597 ,(2015) , 10.1016/J.MOLCEL.2015.05.004
Donaldo Bran, María Marta Azpilicueta, Leonardo A. Gallo, Paula Marchelli, Paula Marchelli, Mario J. Pastorino, Mario J. Pastorino, Marcelo González-Peñalba, Yamila Sabatier, Abel Martinez, Leandro García, Fernando Umaña, Liliana Lozano, Distribución natural de Nothofagus alpina y Nothofagus obliqua (nothofagaceae) en Argentina, dos especies de primera importancia forestal de los bosques templados norpatagónicos Boletin de la Sociedad Argentina de Botanica. ,vol. 46, pp. 131- 138 ,(2011)
M Karan, DS Evans, D Reilly, K Schulte, C Wright, D Innes, TA Holton, DG Nikles, Geoffrey R Dickinson, None, Rapid microsatellite marker development for African mahogany (Khaya senegalensis, Meliaceae) using next-generation sequencing and assessment of its intra-specific genetic diversity Molecular Ecology Resources. ,vol. 12, pp. 344- 353 ,(2012) , 10.1111/J.1755-0998.2011.03080.X
Maria Florencia Pomponio, Cintia Vanesa Acuña, Vivien Petreath, Diego Lopez Lauenstein, Susana Noemi Marcucci Poltri, Susana Leonor Torales, Characterization of functional SSR markers in Prosopis alba and their transferability across Prosopis species Forest Systems. ,vol. 24, pp. 04- ,(2015) , 10.5424/FS/2015242-07188