Modeling Recruitment of Birth Cohorts to the Breeding Population: A Hidden Markov Model Approach

作者: Rachel McCrea , Sophie Caroline Smout , Ruth King , Patrick Pomeroy , Hannah Worthington

DOI: 10.3389/FEVO.2021.600967

关键词:

摘要: Long-term capture-recapture studies provide an opportunity to investigate the population dynamics of long-lived species through individual maturation and adulthood and/or time. We consider data collected on cohorts female grey seals (Halichoerus grypus) born during 1990s later observed breeding Isle May, Firth Forth, Scotland. Female can live for 30+ years but display variability in their rates so recruit into across a range ages. Understanding partially hidden process by which individuals transition from immature members, particular identification any changes this time, are important understanding factors affecting species. Age-structured models explicitly relate recruitment, other demographic parameters interest, age To account monitoring several birth we age-structured model that incorporates specific cohort-structure. Within focus estimation distribution recruitment at colony. process, identifying or trends will offer insight year effects, give more realistic profile current UK seal model. The use Markov provides intuitive framework following evolution true underlying states individuals. breaks down different processes system: population; survival; associated observation process. This specification results explicit compact expression with efficiency fitting. Further, naturally leads extensions complex models, example separation first-time return breeders, relatively simple mathematical structure

参考文章(39)
Shirley Pledger, Murray Efford, Kenneth Pollock, Jaime Collazo, James Lyons, Stopover Duration Analysis with Departure Probability Dependent on Unknown Time Since Arrival Springer, Boston, MA. pp. 349- 363 ,(2009) , 10.1007/978-0-387-78151-8_15
Sophie Smout, Ruth King, Patrick Pomeroy, Integrating heterogeneity of detection and mark loss to estimate survival and transience in UK grey seal colonies Journal of Applied Ecology. ,vol. 48, pp. 364- 372 ,(2011) , 10.1111/J.1365-2664.2010.01913.X
Hall Ailsa J, McConnell Bernie J, Barker Richard J, None, Factors affecting first‐year survival in grey seals and their implications for life history strategy Journal of Animal Ecology. ,vol. 70, pp. 138- 149 ,(2001) , 10.1111/J.1365-2656.2001.00468.X
Tor Arne Øigård, Hans J. Skaug, Fitting state–space models to seal populations with scarce data Ices Journal of Marine Science. ,vol. 72, pp. 1462- 1469 ,(2015) , 10.1093/ICESJMS/FSU195
Sophie Smout, Ruth King, Patrick Pomeroy, Estimating demographic parameters for capture–recapture data in the presence of multiple mark types Environmental and Ecological Statistics. ,vol. 18, pp. 331- 347 ,(2011) , 10.1007/S10651-010-0135-Y
J. D. Lebreton, J. E. Hines, R. Pradel, J. D. Nichols, J. A. Spendelow, Estimation by capture-recapture of recruitment and dispersal over several sites Oikos. ,vol. 101, pp. 253- 264 ,(2003) , 10.1034/J.1600-0706.2003.11848.X
Viviane Hénaux, Thomas Bregnballe, Jean-Dominique Lebreton, Dispersal and recruitment during population growth in a colonial bird, the great cormorant Phalacrocorax carbo sinensis Journal of Avian Biology. ,vol. 38, pp. 44- 57 ,(2007) , 10.1111/J.2006.0908-8857.03712.X