Mayo clinical Text Analysis and Knowledge Extraction System (cTAKES): architecture, component evaluation and applications

作者: Guergana K Savova , James J Masanz , Philip V Ogren , Jiaping Zheng , Sunghwan Sohn

DOI: 10.1136/JAMIA.2009.001560

关键词:

摘要: … system for information extraction from electronic medical record clinical free-text. We describe and evaluate our system, the clinical Text Analysis and Knowledge Extraction System (…

参考文章(53)
Martijn J. Schuemie, Jan A. Kors, Barend Mons, Word Sense Disambiguation in the Biomedical Domain: An Overview Journal of Computational Biology. ,vol. 12, pp. 554- 565 ,(2005) , 10.1089/CMB.2005.12.554
Guergana K. Savova, Anni R. Coden, Igor L. Sominsky, Rie Johnson, Philip V. Ogren, Piet C. de Groen, Christopher G. Chute, Word sense disambiguation across two domains: Biomedical literature and clinical notes Journal of Biomedical Informatics. ,vol. 41, pp. 1088- 1100 ,(2008) , 10.1016/J.JBI.2008.02.003
R. Mack, S. Mukherjea, A. Soffer, N. Uramoto, E. Brown, A. Coden, J. Cooper, A. Inokuchi, B. Iyer, Y. Mass, H. Matsuzawa, L. V. Subramaniam, Text analytics for life science using the unstructured information management architecture Ibm Systems Journal. ,vol. 43, pp. 490- 515 ,(2004) , 10.1147/SJ.433.0490
Ronald Rosenfeld, A maximum entropy approach to adaptive statistical language modelling Computer Speech & Language. ,vol. 10, pp. 187- 228 ,(1996) , 10.1006/CSLA.1996.0011
Anni R. Coden, Serguei V. Pakhomov, Rie K. Ando, Patrick H. Duffy, Christopher G. Chute, Domain-specific language models and lexicons for tagging Journal of Biomedical Informatics. ,vol. 38, pp. 422- 430 ,(2005) , 10.1016/J.JBI.2005.02.009
Stuart L. Nightingale, Electronic Orange Book JAMA. ,vol. 281, pp. 1580- 1580 ,(1999) , 10.1001/JAMA.281.17.1580-JFD90003-2-1
CHARLES R. KEITH, BOOK AND MEDIA REVIEW Journal of the American Academy of Child and Adolescent Psychiatry. ,vol. 29, pp. 152- ,(1990) , 10.1097/00004583-199001000-00028
Lionel T. E. Cheng, Jiaping Zheng, Guergana K. Savova, Bradley J. Erickson, Discerning tumor status from unstructured MRI reports--completeness of information in existing reports and utility of automated natural language processing. Journal of Digital Imaging. ,vol. 23, pp. 119- 132 ,(2010) , 10.1007/S10278-009-9215-7
Jacob Cohen, A Coefficient of agreement for nominal Scales Educational and Psychological Measurement. ,vol. 20, pp. 37- 46 ,(1960) , 10.1177/001316446002000104
Anni Coden, Guergana Savova, Igor Sominsky, Michael Tanenblatt, James Masanz, Karin Schuler, James Cooper, Wei Guan, Piet C. de Groen, Automatically extracting cancer disease characteristics from pathology reports into a Disease Knowledge Representation Model Journal of Biomedical Informatics. ,vol. 42, pp. 937- 949 ,(2009) , 10.1016/J.JBI.2008.12.005