PCR analysis in archival postmortem tissues.

作者: Serena Bonin , F Petrera , B Niccolini , Giorgio Stanta

DOI: 10.1136/MP.56.3.184

关键词:

摘要: Background: Formalin fixed and paraffin wax embedded tissues of necropsy origin are an important source for molecular analysis especially in rare diseases, neuropathology, or epidemiology studies. Because DNA degradation, only short sequences can be amplified from this type tissue, very often less than 100 bases. This poses problems because studies on polymorphism mutations occurring large genes require the long sequences. Methods: The development a simple treatment to obtain longer fragments archival postmortem tissues. Results: It was possible amplify ranging up 300 bases tissues, with no modification usual extraction procedures. To stretches DNA, pre-PCR restoration required, by filling single strand breaks, followed vigorous denaturation step. Conclusions: allowed obtained

参考文章(9)
E.N. Imyanitov, M.Yu. Grigoriev, V.M. Gorodinskaya, E.Sh. Kuligina, K.M. Pozharisski, A.V. Togo, K.P. Hanson, Partial restoration of degraded DNA from archival paraffin-embedded tissues. BioTechniques. ,vol. 31, pp. 1000- 1002 ,(2001) , 10.2144/01315BM04
Béatrice Ninet, Olivier Rutschmann, Karim Burkhardt, Catherine Metral, Bettina Borisch, Bernard Hirschel, Detection of mycobacterial nucleic acids by polymerase chain reaction in fixed tissue specimens of patients with human immunodeficiency virus infection. Swiss HIV Cohort Study. Diagnostic Molecular Pathology. ,vol. 8, pp. 145- 151 ,(1999) , 10.1097/00019606-199909000-00007
Abebe Akalu, Juergen K.V Reichardt, A reliable PCR amplification method for microdissected tumor cells obtained from paraffin-embedded tissue Genetic Analysis: Biomolecular Engineering. ,vol. 15, pp. 229- 233 ,(1999) , 10.1016/S1050-3862(99)00050-9
D. R. Booth, S. Y. Tan, P. N. Hawkins, M. B. Pepys, A. Frustaci, A Novel Variant of Transthyretin, 59Thr→Lys, Associated With Autosomal Dominant Cardiac Amyloidosis in an Italian Family Circulation. ,vol. 91, pp. 962- 967 ,(1995) , 10.1161/01.CIR.91.4.962
Pierre Gressens, Claire Langston, William J. Mitchell, John R. Martin, Detection of viral DNA in neonatal herpes encephalitis autopsy tissues by solution-phase PCR: comparison with pathology and immunohistochemistry. Brain Pathology. ,vol. 3, pp. 237- 250 ,(1993) , 10.1111/J.1750-3639.1993.TB00750.X
Giorgio Stanta, Giusto Trevisan, Serena Bonin, Carla Nobile, Giuseppe Stinco, Detection of Borrelia burgdorferi in skin biopsies from patients with morphea by polymerase chain reaction Journal of The European Academy of Dermatology and Venereology. ,vol. 6, pp. 15- 19 ,(1996) , 10.1016/0926-9959(95)00105-0
Giorgio Stanta, Lory S Crocè, Serena Bonin, Sergio G Tisminetzky, Francisco E Baralle, Claudio Tiribelli, Cohort effect of HCV infection in liver cirrhosis assessed by a 25 year study Journal of Clinical Virology. ,vol. 17, pp. 51- 56 ,(2000) , 10.1016/S1386-6532(00)00072-X
Wilhelm Guschlbauer, Nucleic acid structure ,(1976)