The dark matter rises: the expanding world of regulatory RNAs.

作者: Michael B. Clark , Anupma Choudhary , Martin A. Smith , Ryan J. Taft , John S. Mattick

DOI: 10.1042/BSE0540001

关键词:

摘要: The ability to sequence genomes and characterize their products has begun reveal the central role for regulatory RNAs in biology, especially complex organisms. It is now evident that human genome contains not only protein-coding genes, but also tens of thousands non-protein coding genes express small long ncRNAs (non-coding RNAs). Rapid progress characterizing these identified a diverse range subclasses, which vary widely size, mechanism-of-action, share common functional theme regulating gene expression. play crucial many cellular pathways, including differentiation development cells organs and, when mis-regulated, number diseases. Increasing evidence suggests are major area evolutionary innovation an important determining phenotypic diversity animals.

参考文章(117)
Thomas Cech, Raymond F. Gesteland, John F. Atkins, RNA worlds : from life's origins to diversity in gene regulation Cold Spring Harbor Laboratory Press. ,(2011)
Frank Sleutels, Ronald Zwart, Denise P. Barlow, The non-coding Air RNA is required for silencing autosomal imprinted genes Nature. ,vol. 415, pp. 810- 813 ,(2002) , 10.1038/415810A
Laura Poliseno, Leonardo Salmena, Jiangwen Zhang, Brett Carver, William J. Haveman, Pier Paolo Pandolfi, A coding-independent function of gene and pseudogene mRNAs regulates tumour biology Nature. ,vol. 465, pp. 1033- 1038 ,(2010) , 10.1038/NATURE09144
Wei-Jen Chung, Katsutomo Okamura, Raquel Martin, Eric C. Lai, Endogenous RNA Interference Provides a Somatic Defense against Drosophila Transposons Current Biology. ,vol. 18, pp. 795- 802 ,(2008) , 10.1016/J.CUB.2008.05.006
Julius Brennecke, Alexei A. Aravin, Alexander Stark, Monica Dus, Manolis Kellis, Ravi Sachidanandam, Gregory J. Hannon, Discrete Small RNA-Generating Loci as Master Regulators of Transposon Activity in Drosophila Cell. ,vol. 128, pp. 1089- 1103 ,(2007) , 10.1016/J.CELL.2007.01.043
Chaim Wachtel, James L. Manley, Splicing of mRNA precursors: The role of RNAs and proteins in catalysis Molecular BioSystems. ,vol. 5, pp. 311- 316 ,(2009) , 10.1039/B820828J
P. P. Amaral, M. E. Dinger, T. R. Mercer, J. S. Mattick, The eukaryotic genome as an RNA machine Science. ,vol. 319, pp. 1787- 1789 ,(2008) , 10.1126/SCIENCE.1155472
J. Zhao, B. K. Sun, J. A. Erwin, J.-J. Song, J. T. Lee, Polycomb Proteins Targeted by a Short Repeat RNA to the Mouse X Chromosome Science. ,vol. 322, pp. 750- 756 ,(2008) , 10.1126/SCIENCE.1163045
Christopher A Brosnan, Olivier Voinnet, The long and the short of noncoding RNAs Current Opinion in Cell Biology. ,vol. 21, pp. 416- 425 ,(2009) , 10.1016/J.CEB.2009.04.001
Tim R. Mercer, Dagmar Wilhelm, Marcel E. Dinger, Giulia Soldà, Darren J. Korbie, Evgeny A. Glazov, Vy Truong, Maren Schwenke, Cas Simons, Klaus I. Matthaei, Robert Saint, Peter Koopman, John S. Mattick, Expression of distinct RNAs from 3′ untranslated regions Nucleic Acids Research. ,vol. 39, pp. 2393- 2403 ,(2011) , 10.1093/NAR/GKQ1158