GPS-Lipid: a robust tool for the prediction of multiple lipid modification sites

作者: Yubin Xie , Yueyuan Zheng , Hongyu Li , Xiaotong Luo , Zhihao He

DOI: 10.1038/SREP28249

关键词:

摘要: … tool called GPS-Lipid for the prediction of four classes of lipid modifications by integrating … Lipid was proven to be evidently superior to other similar tools. To facilitate the research of lipid …

参考文章(39)
Marilyn D. Resh, Membrane Targeting of Lipid Modified Signal Transduction Proteins Sub-cellular biochemistry. ,vol. 37, pp. 217- 232 ,(2004) , 10.1007/978-1-4757-5806-1_6
James L. Hougland, Katherine A. Hicks, Heather L. Hartman, Rebekah A. Kelly, Terry J. Watt, Carol A. Fierke, Identification of novel peptide substrates for protein farnesyltransferase reveals two substrate classes with distinct sequence selectivities. Journal of Molecular Biology. ,vol. 395, pp. 176- 190 ,(2010) , 10.1016/J.JMB.2009.10.038
Qi Zhao, Yubin Xie, Yueyuan Zheng, Shuai Jiang, Wenzhong Liu, Weiping Mu, Zexian Liu, Yong Zhao, Yu Xue, Jian Ren, GPS-SUMO: a tool for the prediction of sumoylation sites and SUMO-interaction motifs Nucleic Acids Research. ,vol. 42, pp. 325- 330 ,(2014) , 10.1093/NAR/GKU383
Parag Patwardhan, Marilyn D. Resh, Myristoylation and membrane binding regulate c-Src stability and kinase activity. Molecular and Cellular Biology. ,vol. 30, pp. 4094- 4107 ,(2010) , 10.1128/MCB.00246-10
Wei-Neng Chen, Jun Zhang, Ying Lin, Ni Chen, Zhi-Hui Zhan, Henry Shu-Hung Chung, Yun Li, Yu-Hui Shi, Particle Swarm Optimization With an Aging Leader and Challengers IEEE Transactions on Evolutionary Computation. ,vol. 17, pp. 241- 258 ,(2013) , 10.1109/TEVC.2011.2173577
Yu Xue, Jian Ren, Xinjiao Gao, Changjiang Jin, Longping Wen, Xuebiao Yao, GPS 2.0, a Tool to Predict Kinase-specific Phosphorylation Sites in Hierarchy Molecular & Cellular Proteomics. ,vol. 7, pp. 1598- 1608 ,(2008) , 10.1074/MCP.M700574-MCP200
Marc Symons, Jeff Settleman, Rho family GTPases: more than simple switches. Trends in Cell Biology. ,vol. 10, pp. 415- 419 ,(2000) , 10.1016/S0962-8924(00)01832-8
C. Gallego, S. K. Gupta, S. Winitz, B. J. Eisfelder, G. L. Johnson, Myristoylation of the G alpha i2 polypeptide, a G protein alpha subunit, is required for its signaling and transformation functions. Proceedings of the National Academy of Sciences of the United States of America. ,vol. 89, pp. 9695- 9699 ,(1992) , 10.1073/PNAS.89.20.9695
Jun Mukai, Hui Liu, Rachel A Burt, Dionne E Swor, Wen-Sung Lai, Maria Karayiorgou, Joseph A Gogos, Evidence that the gene encoding ZDHHC8 contributes to the risk of schizophrenia. Nature Genetics. ,vol. 36, pp. 725- 731 ,(2004) , 10.1038/NG1375
Anita M. Preininger, Ali I. Kaya, James A. Gilbert, Laura S. Busenlehner, Richard N. Armstrong, Heidi E. Hamm, Myristoylation Exerts Direct and Allosteric Effects on Gα Conformation and Dynamics in Solution Biochemistry. ,vol. 51, pp. 1911- 1924 ,(2012) , 10.1021/BI201472C