The Transporter Classification Database
作者： Milton H. Saier , Vamsee S. Reddy , Dorjee G. Tamang , Åke Västermark
DOI: 10.1093/NAR/GKT1097
关键词:
摘要: … protein structure, function and mechanism, and therefore, is an essential component of any molecular classification … system of transport protein classification that took cognizance of both …
oup.com
oxfordjournals.org
paperity.org
researchgate.net 参考文章(86)
W. Li, A. Godzik, Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences Bioinformatics. ,vol. 22, pp. 1658- 1659 ,(2006) , 10.1093/BIOINFORMATICS/BTL158
Zheng Zhang, Webb Miller, David J Lipman, Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Research. ,vol. 25, pp. 3389- 3402 ,(1997) , 10.1093/NAR/25.17.3389
Q. Ren, K. Chen, I. T. Paulsen, TransportDB: a comprehensive database resource for cytoplasmic membrane transport systems and outer membrane channels. Nucleic Acids Research. ,vol. 35, pp. 274- 279 ,(2007) , 10.1093/NAR/GKL925
Peter W. Rose, Chunxiao Bi, Wolfgang F. Bluhm, Cole H. Christie, Dimitris Dimitropoulos, Shuchismita Dutta, Rachel K. Green, David S. Goodsell, Andreas Prlić, Martha Quesada, Gregory B. Quinn, Alexander G. Ramos, John D. Westbrook, Jasmine Young, Christine Zardecki, Helen M. Berman, Philip E. Bourne, The RCSB Protein Data Bank: new resources for research and education Nucleic Acids Research. ,vol. 41, pp. 475- 482 ,(2012) , 10.1093/NAR/GKS1200
Jason Tchieu, Milton H Saier, Yufeng Zhai, A web-based Tree View (TV) program for the visualization of phylogenetic trees. Journal of Molecular Microbiology and Biotechnology. ,vol. 4, pp. 69- 70 ,(2002)
Milton H. Saier, Yufeng Zhai, A web-based program (WHAT) for the simultaneous prediction of hydropathy, amphipathicity, secondary structure and transmembrane topology for a single protein sequence. Journal of Molecular Microbiology and Biotechnology. ,vol. 3, pp. 501- ,(2001)
Milton H. Saier, Yufeng Zhai, A web-based program for the prediction of average hydropathy, average amphipathicity and average similarity of multiply aligned homologous proteins. Journal of Molecular Microbiology and Biotechnology. ,vol. 3, pp. 285- ,(2001)
Winona C. Barker, Of URFs and ORFs: A primer on how to analyze derived amino acid sequences: Russell F. Doolittle, University Science Books, Mill Valley, CA. Paperback. Under $15 Genomics. ,vol. 1, pp. 199- 200 ,(1987) , 10.1016/0888-7543(87)90013-9
Protein Families: Relating Protein Sequence, Structure, and Function Wiley Publishing. ,(2014) , 10.1002/9781118743089
Mario Latendresse, Suzanne Paley, Peter D. Karp, Browsing metabolic and regulatory networks with BioCyc. Methods of Molecular Biology. ,vol. 804, pp. 197- 216 ,(2012) , 10.1007/978-1-61779-361-5_11