A meta-analysis of genome-wide association studies to identify prostate cancer susceptibility loci associated with aggressive and non-aggressive disease

作者: A. Amin Al Olama , Z. Kote-Jarai , F. R. Schumacher , F. Wiklund , S. I. Berndt

DOI: 10.1093/HMG/DDS425

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摘要: Genome-wide association studies (GWAS) have identified multiple common genetic variants associated with an increased risk of prostate cancer (PrCa), but these explain less than one-third the heritability. To identify further susceptibility alleles, we conducted a meta-analysis four GWAS including 5953 cases aggressive PrCa and 11 463 controls (men without PrCa). We computed tests for approximately 2.6 million SNPs followed up most significant by genotyping 49 121 samples in 29 through international PRACTICAL BPC3 consortia. not only confirmed locus, rs11672691 on chromosome 19, also showed [odds ratio = 1.12 (95% confidence interval 1.03-1.21), P 1.4 × 10(-8)]. This report describes variant which is PrCa, type poorer prognosis.

参考文章(17)
Rosalyn D Blumenthal, Evelyn Leon, Hans J Hansen, David M Goldenberg, Expression patterns of CEACAM5 and CEACAM6 in primary and metastatic cancers. BMC Cancer. ,vol. 7, pp. 2- 2 ,(2007) , 10.1186/1471-2407-7-2
Rosalind A Eeles, , Zsofia Kote-Jarai, Graham G Giles, Ali Amin Al Olama, Michelle Guy, Sarah K Jugurnauth, Shani Mulholland, Daniel A Leongamornlert, Stephen M Edwards, Jonathan Morrison, Helen I Field, Melissa C Southey, Gianluca Severi, Jenny L Donovan, Freddie C Hamdy, David P Dearnaley, Kenneth R Muir, Charmaine Smith, Melisa Bagnato, Audrey T Ardern-Jones, Amanda L Hall, Lynne T O'Brien, Beatrice N Gehr-Swain, Rosemary A Wilkinson, Angie Cox, Sarah Lewis, Paul M Brown, Sameer G Jhavar, Malgorzata Tymrakiewicz, Artitaya Lophatananon, Sarah L Bryant, Alan Horwich, Robert A Huddart, Vincent S Khoo, Christopher C Parker, Christopher J Woodhouse, Alan Thompson, Tim Christmas, Chris Ogden, Cyril Fisher, Charles Jamieson, Colin S Cooper, Dallas R English, John L Hopper, David E Neal, Douglas F Easton, , , Multiple newly identified loci associated with prostate cancer susceptibility. Nature Genetics. ,vol. 40, pp. 316- 321 ,(2008) , 10.1038/NG.90
S. Lilly Zheng, Wennuan Liu, Fredrik Wiklund, Latchezar Dimitrov, Katarina Bälter, Jielin Sun, Hans-Olov Adami, Jan-Erik Johansson, Jishan Sun, Baoli Chang, Matthew Loza, Aubrey R. Turner, Eugene R. Bleecker, Deborah A. Meyers, John D. Carpten, David Duggan, William B. Isaacs, Jianfeng Xu, Henrik Grönberg, A comprehensive association study for genes in inflammation pathway provides support for their roles in prostate cancer risk in the CAPS study The Prostate. ,vol. 66, pp. 1556- 1564 ,(2006) , 10.1002/PROS.20496
JMM Howson, NM Walker, DJ Smyth, JA Todd, None, Analysis of 19 genes for association with type I diabetes in the Type I Diabetes Genetics Consortium families Genes and Immunity. ,vol. 10, ,(2009) , 10.1038/GENE.2009.96
Meredith Yeager, Nilanjan Chatterjee, Julia Ciampa, Kevin B Jacobs, Jesus Gonzalez-Bosquet, Richard B Hayes, Peter Kraft, Sholom Wacholder, Nick Orr, Sonja Berndt, Kai Yu, Amy Hutchinson, Zhaoming Wang, Laufey Amundadottir, Heather Spencer Feigelson, Michael J Thun, W Ryan Diver, Demetrius Albanes, Jarmo Virtamo, Stephanie Weinstein, Fredrick R Schumacher, Geraldine Cancel-Tassin, Olivier Cussenot, Antoine Valeri, Gerald L Andriole, E David Crawford, Christopher A Haiman, Brian Henderson, Laurence Kolonel, Loic Le Marchand, Afshan Siddiq, Elio Riboli, Timothy J Key, Rudolf Kaaks, William Isaacs, Sarah Isaacs, Kathleen E Wiley, Henrik Gronberg, Fredrik Wiklund, Pär Stattin, Jianfeng Xu, S Lilly Zheng, Jielin Sun, Lars J Vatten, Kristian Hveem, Merethe Kumle, Margaret Tucker, Daniela S Gerhard, Robert N Hoover, Joseph F Fraumeni, David J Hunter, Gilles Thomas, Stephen J Chanock, Identification of a new prostate cancer susceptibility locus on chromosome 8q24 Nature Genetics. ,vol. 41, pp. 1055- 1057 ,(2009) , 10.1038/NG.444
S.L. Slager, D.J. Schaid, J.M. Cunningham, S.K. McDonnell, A.F. Marks, B.J. Peterson, S.J. Hebbring, S. Anderson, A.J. French, S.N. Thibodeau, Confirmation of linkage of prostate cancer aggressiveness with chromosome 19q. American Journal of Human Genetics. ,vol. 72, pp. 759- 762 ,(2003) , 10.1086/368230
Fang-Chi Hsu, Jielin Sun, Fredrik Wiklund, Sarah D. Isaacs, Kathleen E. Wiley, Lina D. Purcell, Zhengrong Gao, Pär Stattin, Yi Zhu, Seong-Tae Kim, Zheng Zhang, Wennuan Liu, Bao-Li Chang, Patrick C. Walsh, David Duggan, John D. Carpten, William B. Isaacs, Henrik Grönberg, Jianfeng Xu, S. Lilly Zheng, A novel prostate cancer susceptibility locus at 19q13 Cancer Research. ,vol. 69, pp. 2720- 2723 ,(2009) , 10.1158/0008-5472.CAN-08-3347
David Baillat, Ramin Shiekhattar, Functional Dissection of the Human TNRC6 (GW182-Related) Family of Proteins Molecular and Cellular Biology. ,vol. 29, pp. 4144- 4155 ,(2009) , 10.1128/MCB.00380-09
Daniel W. Lin, Liesel M. FitzGerald, Rong Fu, Erika M. Kwon, Siqun Lilly Zheng, Suzanne Kolb, Fredrik Wiklund, Pär Stattin, William B. Isaacs, Jianfeng Xu, Elaine A. Ostrander, Ziding Feng, Henrik Grönberg, Janet L. Stanford, Genetic Variants in the LEPR, CRY1, RNASEL, IL4, and ARVCF Genes Are Prognostic Markers of Prostate Cancer-Specific Mortality Cancer Epidemiology, Biomarkers & Prevention. ,vol. 20, pp. 1928- 1936 ,(2011) , 10.1158/1055-9965.EPI-11-0236