Bacterial Motility Patterns Reveal Importance of Exploitation over Exploration in Marine Microhabitats. Part I: Theory

作者: Li Xie , Xiao-Lun Wu

DOI: 10.1016/J.BPJ.2014.07.058

关键词:

摘要: Bacteria use different motility patterns to navigate and explore natural habitats. However, how these are selected, what their benefits may be, not understood. In this article, we analyze the effect of on a cell’s ability migrate in chemical gradient localize at top gradient, two most important characteristics bacterial chemotaxis. We will focus patterns, run-tumble run-reverse-flick, that observed characterized enteric bacterium Escherichia coli marine Vibrio alginolyticus, respectively. To make an objective comparison, master equations developed basis microscopic motions bacteria. An unexpected yet significant result is by adopting run-reverse-flick pattern, can reduce its diffusivity without compromising drift in gradient. This finding biologically as it suggests pattern improve microorganism’s sequester nutrients competitive environment.

参考文章(21)
Mark J. Schnitzer, Theory of continuum random walks and application to chemotaxis Physical Review E. ,vol. 48, pp. 2553- 2568 ,(1993) , 10.1103/PHYSREVE.48.2553
Y. Tu, T. S. Shimizu, H. C. Berg, Modeling the chemotactic response of Escherichia coli to time-varying stimuli Proceedings of the National Academy of Sciences of the United States of America. ,vol. 105, pp. 14855- 14860 ,(2008) , 10.1073/PNAS.0807569105
Radek Erban, Hans G. Othmer, From Individual to Collective Behavior in Bacterial Chemotaxis Siam Journal on Applied Mathematics. ,vol. 65, pp. 361- 391 ,(2004) , 10.1137/S0036139903433232
J. E. Segall, S. M. Block, H. C. Berg, Temporal comparisons in bacterial chemotaxis. Proceedings of the National Academy of Sciences of the United States of America. ,vol. 83, pp. 8987- 8991 ,(1986) , 10.1073/PNAS.83.23.8987
Evelyn F. Keller, Lee A. Segel, Model for chemotaxis Journal of Theoretical Biology. ,vol. 30, pp. 225- 234 ,(1971) , 10.1016/0022-5193(71)90050-6
Tuba Altindal, Li Xie, Xiao-Lun Wu, Implications of Three-Step Swimming Patterns in Bacterial Chemotaxis Biophysical Journal. ,vol. 100, pp. 32- 41 ,(2011) , 10.1016/J.BPJ.2010.11.029
James G. Mitchell, The Energetics and Scaling of Search Strategies in Bacteria The American Naturalist. ,vol. 160, pp. 727- 740 ,(2002) , 10.1086/343874
Shiraz Kalir, J McClure, K Pabbaraju, C Southward, M Ronen, S Leibler, MG Surette, Uri Alon, Ordering Genes in a Flagella Pathway by Analysis of Expression Kinetics from Living Bacteria Science. ,vol. 292, pp. 2080- 2083 ,(2001) , 10.1126/SCIENCE.1058758
Tuba Altindal, Suddhashil Chattopadhyay, Xiao-Lun Wu, Bacterial Chemotaxis in an Optical Trap PLoS ONE. ,vol. 6, pp. e18231- ,(2011) , 10.1371/JOURNAL.PONE.0018231
A. Celani, M. Vergassola, Bacterial strategies for chemotaxis response Proceedings of the National Academy of Sciences of the United States of America. ,vol. 107, pp. 1391- 1396 ,(2010) , 10.1073/PNAS.0909673107