CTCF-binding elements mediate control of V(D)J recombination

作者: Chunguang Guo , Hye Suk Yoon , Andrew Franklin , Suvi Jain , Anja Ebert

DOI: 10.1038/NATURE10495

关键词:

摘要: Immunoglobulin heavy chain (IgH) variable region exons are assembled from V(H), D and J(H) gene segments in developing B lymphocytes. Within the 2.7-megabase mouse Igh locus, V(D)J recombination is regulated to ensure specific diverse antibody repertoires. Here we report mice a key regulatory region, termed intergenic control 1 (IGCR1), which lies between V(H) clusters. Functionally, IGCR1 uses CTCF looping/insulator factor-binding elements and, correspondingly, mediates loops containing distant enhancers. promotes normal B-cell development balances repertoires by inhibiting transcription rearrangement of D(H)-proximal promoting distal segments. maintains ordered lineage-specific V(H)(D)J(H) suppressing joining not joined segments, DJ(H) joins thymocytes, respectively. also required for feedback regulation allelic exclusion proximal V(H)-to-DJ(H) recombination. Our studies elucidate long-sought indicate new role generally expressed protein.

参考文章(53)
Iratxe Abarrategui, Michael S. Krangel, Germline transcription: a key regulator of accessibility and recombination. Advances in Experimental Medicine and Biology. ,vol. 650, pp. 93- 102 ,(2009) , 10.1007/978-1-4419-0296-2_8
Eric Pinaud, Marie Marquet, Rémi Fiancette, Sophie Péron, Christelle Vincent-Fabert, Yves Denizot, Michel Cogné, The IgH locus 3' regulatory region: pulling the strings from behind. Advances in Immunology. ,vol. 110, pp. 27- 70 ,(2011) , 10.1016/B978-0-12-387663-8.00002-8
Yu Zhang, Monica Gostissa, Dominic G. Hildebrand, Michael S. Becker, Cristian Boboila, Roberto Chiarle, Susanna Lewis, Frederick W. Alt, The Role of Mechanistic Factors in Promoting Chromosomal Translocations Found in Lymphoid and Other Cancers Advances in Immunology. ,vol. 106, pp. 93- 133 ,(2010) , 10.1016/S0065-2776(10)06004-9
Thomas Perlot, Frederick W. Alt, Cis-regulatory elements and epigenetic changes control genomic rearrangements of the IgH locus. Advances in Immunology. ,vol. 99, pp. 1- 32 ,(2008) , 10.1016/S0065-2776(08)00601-9
J. Chen, F. Young, A. Bottaro, V. Stewart, R.K. Smith, F.W. Alt, Mutations of the intronic IgH enhancer and its flanking sequences differentially affect accessibility of the JH locus. The EMBO Journal. ,vol. 12, pp. 4635- 4645 ,(1993) , 10.1002/J.1460-2075.1993.TB06152.X
F.W. Alt, G.D. Yancopoulos, T.K. Blackwell, C. Wood, E. Thomas, M. Boss, R. Coffman, N. Rosenberg, S. Tonegawa, D. Baltimore, Ordered rearrangement of immunoglobulin heavy chain variable region segments. The EMBO Journal. ,vol. 3, pp. 1209- 1219 ,(1984) , 10.1002/J.1460-2075.1984.TB01955.X
Stephanie C. Degner, Timothy P. Wong, Gytis Jankevicius, Ann J. Feeney, Cutting Edge: Developmental Stage-Specific Recruitment of Cohesin to CTCF Sites throughout Immunoglobulin Loci during B Lymphocyte Development Journal of Immunology. ,vol. 182, pp. 44- 48 ,(2009) , 10.4049/JIMMUNOL.182.1.44
Roshi Afshar, Steven Pierce, Daniel J. Bolland, Anne Corcoran, Eugene M. Oltz, Regulation of IgH gene assembly: role of the intronic enhancer and 5'DQ52 region in targeting DHJH recombination. Journal of Immunology. ,vol. 176, pp. 2439- 2447 ,(2006) , 10.4049/JIMMUNOL.176.4.2439