A radiation hybrid transcript map of the mouse genome
作者： Philip Avner , Thomas Bruls , Isabelle Poras , Lorraine Eley , Shahinaz Gas
DOI: 10.1038/NG1001-194
关键词:
摘要: Expressed-sequence tag (EST) maps are an adjunct to sequence-based analytical methods of gene detection and localization for those species which such data available, provide anchors high-density homology orthology mapping in large-scale sequencing has yet be done1. Species radiation hybrid–based transcript have been established include human2, rat3,4,5, mouse6, dog7, cat8 zebrafish9,10. We a comprehensive first-generation–placement hybrid map the mouse consisting 5,904 mapped markers (3,993 ESTs 1,911 sequence-tagged sites (STSs)). The ESTs, often originate from small-EST clusters, enriched genes expressed during early embryogenesis probably different localized humans. confirmed by situ hybridization that even singleton usually not retained studies, may represent bona fide transcribed sequences. Our studies on chromosomes 12 14 orthologous human chromosome show power our as predictive tool
core.ac.uk
elsevier.com
nature.com
sci-hub.se 参考文章(31)
David Applegate, Robert Bixby, William Cook, Vasek Chvátal, On the Solution of Traveling Salesman Problems ,(1998)
Dan Gusfield, Algorithms on Strings, Trees, and Sequences: Suffix Trees and Their Uses ,(1997) , 10.1017/CBO9780511574931
M Boehnke, K Lange, D R Cox, Statistical methods for multipoint radiation hybrid mapping. American Journal of Human Genetics. ,vol. 49, pp. 1174- 1188 ,(1991)
Robert Geisler, Gerd-Jörg Rauch, Herwig Baier, Frauke van Bebber, Linda Broβ, Marcus P.S. Dekens, Karin Finger, Cornelia Fricke, Michael A. Gates, Horst Geiger, Silke Geiger-Rudolph, Darren Gilmour, Stefanie Glaser, Lara Gnügge, Hinrich Habeck, Katy Hingst, Scott Holley, Jeremy Keenan, Anette Kirn, Holger Knaut, Deval Lashkari, Florian Maderspacher, Ulrike Martyn, Stephan Neuhauss, Carl Neumann, Teresa Nicolson, Francisco Pelegri, Russell Ray, Jens M. Rick, Henry Roehl, Tobias Roeser, Heike E. Schauerte, Alexander F. Schier, Ulrike Schönberger, Helia-Berrit Schönthaler, Stefan Schulte-Merker, Catrin Seydler, William S. Talbot, Christian Weiler, Christiane Nüsslein-Volhard, Pascal Haffter, A radiation hybrid map of the zebrafish genome Nature Genetics. ,vol. 23, pp. 86- 89 ,(1999) , 10.1038/12692
Kenro Kusumi, Eileen Sun, Anne W. Kerrebrock, Roderick T. Bronson, Dow-Chung Chi, Monique Bulotsky, Jessica B. Spencer, Bruce W. Birren, Wayne N. Frankel, Eric S. Lander, The mouse pudgy mutation disrupts Delta homologue Dll3 and initiation of early somite boundaries Nature Genetics. ,vol. 19, pp. 274- 278 ,(1998) , 10.1038/961
Takeshi K. Watanabe, Marie-Therese Bihoreau, Linda C. McCarthy, Susanna L. Kiguwa, Haretsugu Hishigaki, Atsushi Tsuji, Julie Browne, Yuki Yamasaki, Ayako Mizoguchi-Miyakita, Keiko Oga, Toshihide Ono, Shiro Okuno, Naohide Kanemoto, Ei-ichi Takahashi, Kazuhiro Tomita, Hiromi Hayashi, Masakazu Adachi, Caleb Webber, Marie Davis, Susanne Kiel, Catherine Knights, Angela Smith, Ricky Critcher, Jonathan Miller, Thiru Thangarajah, Philip J.R. Day, James R. Hudson, Yasuo Irie, Toshihisa Takagi, Yusuke Nakamura, Peter N. Goodfellow, G. Mark Lathrop, Akira Tanigami, Michael R. James, A radiation hybrid map of the rat genome containing 5,255 markers. Nature Genetics. ,vol. 22, pp. 27- 36 ,(1999) , 10.1038/8737
William J. Van Etten, Robert G. Steen, Huy Nguyen, Andrew B. Castle, Donna K. Slonim, Bing Ge, Chad Nusbaum, Greg D. Schuler, Eric S. Lander, Thomas J. Hudson, Radiation hybrid map of the mouse genome. Nature Genetics. ,vol. 22, pp. 384- 387 ,(1999) , 10.1038/11962
Thomas J. Hudson, Deanna M. Church, Simon Greenaway, Huy Nguyen, April Cook, Robert G. Steen, William J. Van Etten, Andrew B. Castle, Mark A. Strivens, Pamela Trickett, Christine Heuston, Claire Davison, Anne Southwell, Rachel Hardisty, Anabel Varela-Carver, Andrew R. Haynes, Patricia Rodriguez-Tome, Hirofumi Doi, Minoru S.H. Ko, Joan Pontius, Lynn Schriml, Lukas Wagner, Donna Maglott, Steve D.M. Brown, Eric S. Lander, Greg Schuler, Paul Denny, A radiation hybrid map of mouse genes. Nature Genetics. ,vol. 29, pp. 201- 205 ,(2001) , 10.1038/NG1001-201
Linda C McCarthy, Jonathan Terrett, Maria E Davis, Catherine J Knights, Angela L Smith, Ricky Critcher, Karin Schmitt, Jim Hudson, Nigel K Spurr, Peter N Goodfellow, None, A First-Generation Whole Genome–Radiation Hybrid Map Spanning the Mouse Genome Genome Research. ,vol. 7, pp. 1153- 1161 ,(1997) , 10.1101/GR.7.12.1153
Cathryn S Mellersh, Christophe Hitte, Melissa Richman, Francoise Vignaux, Catherine Priat, Sophie Jouquand, Petra Werner, Catherine André, Susan DeRose, Donald F Patterson, Elaine A Ostrander, Francis Galibert, None, An integrated linkage-radiation hybrid map of the canine genome. Mammalian Genome. ,vol. 11, pp. 120- 130 ,(2000) , 10.1007/S003350010024