Genome-wide phylogenetic and structural analysis reveals the molecular evolution of the ABA receptor gene family.

作者: Jing-Fang Yang , Mo-Xian Chen , Jian-Hua Zhang , Ge-Fei Hao , Guang-Fu Yang

DOI: 10.1093/JXB/ERZ511

关键词:

摘要: The plant hormone abscisic acid (ABA) plays a crucial role during the life cycle as well in adaptive responses to environmental stresses. core regulatory components of ABA signaling plants are pyrabactin resistance1/PYR1-like/regulatory component receptor family (PYLs), which comprise largest known. They act negative regulators members protein phosphatase type 2C family. Due biological importance PYLs, many researchers have focused on their genetic redundancy and consequent functional divergence. However, little is understood evolution its impact generation diversity. In this study, we identify positive selection divergence PYLs through phylogenetic reconstruction, gene structure expression pattern analysis, comparison. We found correlation desensitization under specific modifications molecular recognition domain with diversification. Hence, an interesting antagonistic co-evolutionary mechanism proposed for diversification proteins. believe compensatory evolutionary pathway may occurred.

参考文章(95)
Juan Li, Chaowei Shi, Demeng Sun, Yao He, Chaohua Lai, Pei Lv, Ying Xiong, Longhua Zhang, Fangming Wu, Changlin Tian, The HAB1 PP2C is inhibited by ABA-dependent PYL10 interaction. Scientific Reports. ,vol. 5, pp. 10890- 10890 ,(2015) , 10.1038/SREP10890
Anna V. Klepikova, Maria D. Logacheva, Sergey E. Dmitriev, Aleksey A. Penin, RNA-seq analysis of an apical meristem time series reveals a critical point in Arabidopsis thaliana flower initiation BMC Genomics. ,vol. 16, pp. 466- 466 ,(2015) , 10.1186/S12864-015-1688-9
Sang-Youl Park, Lesia Rodriguez, Miguel Gonzalez-Guzman, Malene Ringkjøbing Jensen, Natalio Krasnogor, Martin Blackledge, Michael Holdsworth, Sean R Cutler, Pedro L Rodriguez, José Antonio Márquez, Florine Dupeux, Julia Santiago, Katja Betz, Jamie Twycross, A thermodynamic switch modulates abscisic acid receptor sensitivity. The EMBO Journal. ,vol. 30, pp. 4171- 4184 ,(2011) , 10.1038/EMBOJ.2011.294
Zhen-Ming Pei, Yoshiyuki Murata, Gregor Benning, Sébastien Thomine, Birgit Klüsener, Gethyn J. Allen, Erwin Grill, Julian I. Schroeder, Calcium channels activated by hydrogen peroxide mediate abscisic acid signalling in guard cells Nature. ,vol. 406, pp. 731- 734 ,(2000) , 10.1038/35021067
Soo Young Kim, Recent advances in ABA signaling Journal of Plant Biology. ,vol. 50, pp. 117- 121 ,(2007) , 10.1007/BF03030619
Ken-ichi Miyazono, Takuya Miyakawa, Yoriko Sawano, Keiko Kubota, Hee-Jin Kang, Atsuko Asano, Yumiko Miyauchi, Mihoko Takahashi, Yuehua Zhi, Yasunari Fujita, Takuya Yoshida, Ken-Suke Kodaira, Kazuko Yamaguchi-Shinozaki, Masaru Tanokura, Structural basis of abscisic acid signalling Nature. ,vol. 462, pp. 609- 614 ,(2009) , 10.1038/NATURE08583
M. Okamoto, F. C. Peterson, A. Defries, S.-Y. Park, A. Endo, E. Nambara, B. F. Volkman, S. R. Cutler, Activation of dimeric ABA receptors elicits guard cell closure, ABA-regulated gene expression, and drought tolerance Proceedings of the National Academy of Sciences of the United States of America. ,vol. 110, pp. 12132- 12137 ,(2013) , 10.1073/PNAS.1305919110
Christopher I. Bayly, Piotr Cieplak, Wendy Cornell, Peter A. Kollman, A well-behaved electrostatic potential based method using charge restraints for deriving atomic charges: the RESP model The Journal of Physical Chemistry. ,vol. 97, pp. 10269- 10280 ,(1993) , 10.1021/J100142A004