Transcriptomic analyses reveal groups of co-expressed, syntenic lncRNAs in four species of the genus Caenorhabditis

Cinta Pegueroles , Susana Iraola-Guzmán , Uciel Chorostecki , Ewa Ksiezopolska
RNA Biology 16 ( 3) 320 -329

6
2019
Oral microbiome in down syndrome and its implications on oral health

Carlo Carolis , Jochen Hecht , Julia Ponomarenko , Toni Gabaldón
Journal of Oral Microbiology 13 ( 1) 1865690 -1865690

1
2021
The Leishmania metaphylome: a comprehensive survey of Leishmania protein phylogenetic relationships

Hugo O. Valdivia , Larissa L. S. Scholte , Guilherme Oliveira , Toni Gabaldón
BMC Genomics 16 ( 1) 887 -887

11
2015
Genome sequencing and secondary metabolism of the postharvest pathogen Penicillium griseofulvum

Houda Banani , Marina Marcet-Houben , Ana-Rosa Ballester , Pamela Abbruscato
BMC Genomics 17 ( 1) 19 -19

48
2016
44
2015
An anaerobic mitochondrion that produces hydrogen

Brigitte Boxma , Rob M. de Graaf , Georg W. M. van der Staay , Theo A. van Alen
Nature 434 ( 7029) 74 -79

204
2005
MetaPhOrs 2.0: integrative, phylogeny-based inference of orthology and paralogy across the tree of life

Uciel Chorostecki , Manuel Molina , Leszek P Pryszcz , Toni Gabaldón
Nucleic Acids Research 48

5
2020
nextPARS: Parallel probing of RNA structures in Illumina

Ester Saus , Jesse R Willis , Leszek P Pryszcz , Ahmed Hafez
bioRxiv 174144

21
2017
Widespread Inter- and Intra-Domain Horizontal Gene Transfer of d-Amino Acid Metabolism Enzymes in Eukaryotes.

Miguel A. Naranjo-Ortíz , Matthias Brock , Sascha Brunke , Bernhard Hube
Frontiers in Microbiology 7 2001

13
2016
Origin, diversification and substrate specificity in the family of NCS1/FUR transporters

Emilia Krypotou , Thomas Evangelidis , Jacob Bobonis , Alexandros A. Pittis
Molecular Microbiology 96 ( 5) 927 -950

42
2015
selection of Marker Genes Using Whole-Genome DnA polymorphism Analysis

Harry M. Bohle , Toni Gabaldón
Evolutionary Bioinformatics 8 ( 8) 161 -169

6
2012
Origin and evolution of the peroxisomal proteome

Toni Gabaldón , Berend Snel , Frank van Zimmeren , Wieger Hemrika
Biology Direct 1 ( 1) 8 -8

151
2006
Origin and evolution of metabolic sub-cellular compartmentalization in eukaryotes.

Toni Gabaldón , Alexandros A. Pittis
Biochimie 119 262 -268

55
2015
Phylogenetic Analyses Uncover a Novel Clade of Transferrin in Nonmammalian Vertebrates

Hirzahida Mohd-Padil , Adura Mohd-Adnan , Toni Gabaldón
Molecular Biology and Evolution 30 ( 4) 894 -905

8
2013
Lokiarchaeota Marks the Transition between the Archaeal and Eukaryotic Selenocysteine Encoding Systems

Marco Mariotti , Alexei V. Lobanov , Bruno Manta , Didac Santesmasses
Molecular Biology and Evolution 33 ( 9) 2441 -2453

24
2016
ArthropodaCyc: a CycADS powered collection of BioCyc databases to analyse and compare metabolism of arthropods

Patrice Baa-Puyoulet , Nicolas Parisot , Gérard Febvay , Jaime Huerta-Cepas
Database 2016 ( 2016) 1 -9

10
2016
Acquisition of prokaryotic genes by fungal genomes.

Marina Marcet-Houben , Toni Gabaldón
Trends in Genetics 26 ( 1) 5 -8

227
2010
High-Throughput Proteomics Reveals the Unicellular Roots of Animal Phosphosignaling and Cell Differentiation.

Arnau Sebé-Pedrós , Marcia Ivonne Peña , Salvador Capella-Gutiérrez , Meritxell Antó
Developmental Cell 39 ( 2) 186 -197

30
2016
Massive gene presence-absence variation shapes an open pan-genome in the Mediterranean mussel.

Marco Gerdol , Rebeca Moreira , Fernando Cruz , Jessica Gómez-Garrido
Genome Biology 21 ( 1) 275 -275

76
2020
Genome and transcriptome analysis of the Mesoamerican common bean and the role of gene duplications in establishing tissue and temporal specialization of genes

Anna Vlasova , Salvador Capella-Gutiérrez , Martha Rendón-Anaya , Miguel Hernández-Oñate
Genome Biology 17 ( 1) 32 -32

101
2016