Jesper J. Madsen
机构: University of South Florida
每年引用次数
引用次数
引用: 682
H-指数: 16
I10-指数 : 20
出版物: 63
Structural and functional characterization of protein complexes in the blood coagulation cascade
Jesper Jonasson Madsen ,
1
2014
Conformational Plasticity-Rigidity Axis of the Coagulation Factor VII Zymogen Elucidated by Atomistic Simulations of the N-Terminally Truncated Factor VIIa Protease Domain.
Ole H Olsen , Jesper J Madsen
Biomolecules 11 ( 4) 549
2021
Overlay databank unlocks data-driven analyses of biomolecules for all
Anne M Kiirikki , Hanne S Antila , Lara S Bort , Pavel Buslaev
Nature Communications 15 ( 1) 1136 -1136
7
2024
Inverse Conformational Selection in Lipid–Protein Binding
Amélie Bacle , Pavel Buslaev , Rebeca Garcia-Fandino , Fernando Favela-Rosales
Journal of the American Chemical Society
25
2021
Quantitative comparison against experiments reveals imperfections in force fields’ descriptions of popc–cholesterol interactions
Matti Javanainen , Peter Heftberger , Jesper J Madsen , Markus S Miettinen
Journal of Chemical Theory and Computation 19 ( 18) 6342 -6352
10
2023
SUPPORTING INFORMATION: Headgroup Structure and Cation Binding in Phosphatidylserine Lipid Bilayers
Hanne Antila , Pavel Buslaev , Fernando Favela-Rosales , Tiago M Ferreira
Evaluating Polarizable Biomembrane Simulations against Experiments
Hanne S Antila , Sneha Dixit , Batuhan Kav , Jesper J Madsen
Journal of Chemical Theory and Computation
2024
A Hybrid Approach Toward Systematically-Derived Implicit-Solvent Coarse-Grained Lipid Models
Alexander J Pak , Thomas Dannenhoffer-Lafage , Jesper J Madsen , Gregory A Voth
2018 AIChE Annual Meeting
2018
A Generic Coarse-Grained Model of Influenza Budding: What Can We Learn?
Jesper J Madsen , John MA Grime , Gregory A Voth
2017 AIChE Annual Meeting
2017
M2-Mediated Influenza Virus Budding and Scission: From Basic Principles to Control
Jesper J Madsen , John MA Grime , Gregory A Voth
2017 AIChE Annual Meeting
2017
Submission PDF
Jesper J Madsen , John MA Grime , Jeremy S Rossman , Gregory A Voth
PNAS 67 68 -68
An in-membrane NMR spectroscopic approach probing native ligand-GPCR interaction
Xudong Wang , Nabila Bushra , Martin Muschol , Jesper J Madsen
International Journal of Biological Macromolecules 206 911 -916
8
2022
A 19F-qNMR-Guided Mathematical Model for G Protein-Coupled Receptor Signaling
Jesús Giraldo , Jesper J Madsen , Xudong Wang , Lei Wang
Molecular Pharmacology 105 ( 1) 54 -62
2024
Molecular Basis of Enhanced Activity in Factor VIIa-Trypsin Variants Conveys Insights into Tissue Factor-mediated Allosteric Regulation of Factor VIIa Activity
Anders B Sorensen , Jesper J Madsen , L Anders Svensson , Anette A Pedersen
Journal of Biological Chemistry 291 ( 9) 4671 -4683
10
2016
Allostery in Coagulation Factor VIIa Revealed by Ensemble Refinement of Crystallographic Structures
Anders B Sorensen , Jesper J Madsen , Thomas M Frimurer , Michael T Overgaard
Biophysical Journal 116 ( 10) 1823 -1835
1
2019
A systematic approach for evaluating the role of surface-exposed loops in trypsin-like serine proteases applied to the 170 loop in coagulation factor VIIa
Anders B Sorensen , Per Jr Greisen , Jesper J Madsen , Jacob Lund
Scientific Reports 12 ( 1) 3747 -3747
1
2022
Efficient simulation of tunable lipid assemblies across scales and resolutions
John M A Grime , Jesper J Madsen
arXiv preprint arXiv:1910.05362
17
2019
19F NMR: A promising tool for dynamic conformational studies of G protein-coupled receptors
Libin Ye , Xudong Wang , Aidan McFarland , Jesper J Madsen
Structure 30 ( 10) 1372 -1384
10
2022
Trifluorinated keto–enol tautomeric switch in probing domain rotation of a G protein-coupled receptor
Xudong Wang , Wenjie Zhao , Sameer Al-Abdul-Wahid , Yiming Lu
Bioconjugate Chemistry 32 ( 1) 99 -105
9
2020
Staphylococcus aureus FtsZ and PBP4 bind to the conformationally dynamic N-terminal domain of GpsB
Michael D Sacco , Lauren R Hammond , Radwan E Noor , Dipanwita Bhattacharya
Elife 13 e85579 -e85579
7
2024
Gregory A. Voth Samuli Ollila Matti Javanainen Pavel Buslaev Hanne Antila Batuhan Kav Libin Ye Fernando Favela-Rosales Josef Melcr Ivan Gushchin Prafull S. Gandhi Anders Bundgård Sørensen Michael Toft Overgaard William DeGrado Mei Hong Jessica M. J. Swanson Maartje van den Biggelaar Alexander J. Pak Thomas Dannenhoffer-Lafage