Niranjan Srinivas

N Srinivas , G Seelig , E Winfree , D Soloveichik

DNA computing and molecular programming

Chris Thachuk , E Winfree , D Soloveichik
Lecture Notes in Computer Science 133 -153

8
2015
Deep Molecular Programming: A Natural Implementation of Binary-Weight ReLU Neural Networks

David Soloveichik , Sarfraz Khurshid , Cameron Chalk , Marko Vasic
international conference on machine learning 1 9701 -9711

1
2020
Effective design principles for leakless strand displacement systems

Boya Wang , Chris Thachuk , Andrew D. Ellington , Erik Winfree
Proceedings of the National Academy of Sciences of the United States of America 115 ( 52) 201806859

91
2018
Robustness of Expressivity in Chemical Reaction Networks

Robert Brijder , David Doty , David Soloveichik
International Conference on DNA-Based Computers 52 -66

2
2016
DNA punch cards for storing data on native DNA sequences via enzymatic nicking

S. Kasra Tabatabaei , Boya Wang , Nagendra Bala Murali Athreya , Behnam Enghiad
Nature Communications 11 ( 1) 1742

61
2020
Stable leader election in population protocols requires linear time

David Doty , David Soloveichik
Distributed Computing 31 ( 4) 257 -271

47
2018
Speed faults in computation by chemical reaction networks

Ho-Lin Chen , Rachel Cummings , David Doty , David Soloveichik
Distributed Computing 30 ( 5) 373 -390

10
2017
DNA as a Universal Substrate for Chemical Kinetics

David Soloveichik , Georg Seelig , Erik Winfree
international workshop on dna-based computers 57 -69

712
2009
Robust Detection in Leak-Prone Population Protocols

Dan Alistarh , Bartłomiej Dudek , Adrian Kosowski , David Soloveichik
international conference on dna computing 10467 155 -171

7
2017
The design space of strand displacement cascades with toehold-size clamps

Boya Wang , Chris Thachuk , Andrew D. Ellington , David Soloveichik
international conference on dna computing 64 -81

5
2017
Thermodynamic Binding Networks

David Doty , Trent A. Rogers , David Soloveichik , Chris Thachuk
international conference on dna computing 10467 249 -266

6
2017
Enzyme-Free Nucleic Acid Dynamical Systems

Niranjan Srinivas , James Parkin , Georg Seelig , Erik Winfree
bioRxiv 138420

260
2017
Complexity of Self-Assembled Shapes

David Soloveichik , Erik Winfree
arXiv: Computational Complexity

273
2004
Computing properties of stable configurations of thermodynamic binding networks

Keenan Breik , Chris Thachuk , Marijn Heule , David Soloveichik
Theoretical Computer Science 785 17 -29

3
2019
Rate-independent computation in continuous chemical reaction networks

Ho-Lin Chen , David Doty , David Soloveichik
conference on innovations in theoretical computer science 313 -326

46
2014
The computational power of Benenson automata

David Soloveichik , Erik Winfree
Theoretical Computer Science 344 ( 2) 279 -297

23
2005
Erratum to “The computational power of Benenson automata” [Theoret. Comput. Sci. 344 (2005) 279-297]

David Soloveichik , Erik Winfree
Theoretical Computer Science 412 ( 43) 6112 -6113

1
2011
Programmable chemical controllers made from DNA

Yuan-Jyue Chen , Neil Dalchau , Niranjan Srinivas , Andrew Phillips
Nature Nanotechnology 8 ( 10) 755 -762

377
2013