The Functional Consequences of Variation in Transcription Factor Binding

Darren A. Cusanovich , Bryan Pavlovic , Jonathan K. Pritchard , Yoav Gilad
PLoS Genetics 10 ( 3) e1004226

150
2014
An Evolutionarily Conserved Sexual Signature in the Primate Brain

Björn Reinius , Peter Saetre , Jennifer A. Leonard , Ran Blekhman
PLoS Genetics 4 ( 6) e1000100

75
2008
Bacterial infection remodels the DNA methylation landscape of human dendritic cells

Alain Pacis , Ludovic Tailleux , Alexander M. Morin , John Lambourne
Genome Research 25 ( 12) 1801 -1811

129
2015
Predicting susceptibility to tuberculosis based on gene expression profiling in dendritic cells.

John D. Blischak , Ludovic Tailleux , Marsha Myrthil , Cécile Charlois
Scientific Reports 7 ( 1) 5702 -5702

3
2017
Reducing mitochondrial reads in ATAC-seq using CRISPR/Cas9

Lindsey Montefiori , Liana Hernandez , Zijie Zhang , Yoav Gilad
Scientific Reports 7 ( 1) 2451 -2451

56
2017
Reorganization of 3D genome structure may contribute to gene regulatory evolution in primates.

Ittai E. Eres , Kaixuan Luo , Chiaowen Joyce Hsiao , Lauren E. Blake
PLOS Genetics 15 ( 7)

27
2019
Host genetic variation in mucosal immunity pathways influences the upper airway microbiome.

Catherine Igartua , Emily R. Davenport , Yoav Gilad , Dan L. Nicolae
Microbiome 5 ( 1) 16

35
2017
RNA splicing is a primary link between genetic variation and disease

Yang I. Li , Bryce van de Geijn , Anil Raj , David A. Knowles
Science 352 ( 6285) 600 -604

522
2016
Abstract LB-332: MDM4 transcription is discordantly regulated by common variants of p53

Russell Bainer , John Marioni , Luis Barriero , Ran Blekhman
Cancer Research 70

2010
Natural selection on the olfactory receptor gene family in humans and chimpanzees

Yoav Gilad , Carlos D. Bustamante , Doron Lancet , Svante Pääbo
American Journal of Human Genetics 73 ( 3) 489 -501

135
2003
A Combination of Genomic Approaches Reveals the Role of FOXO1a in Regulating an Oxidative Stress Response Pathway

Paola de Candia , Ran Blekhman , Adrien E. Chabot , Alicia Oshlack
PLoS ONE 3 ( 2) e1670

44
2008
WASP: allele-specific software for robust molecular quantitative trait locus discovery

Bryce van de Geijn , Graham McVicker , Yoav Gilad , Jonathan K Pritchard
Nature Methods 12 ( 11) 1061 -1063

274
2015
A Methodological Assessment and Characterization of Genetically-Driven Variation in Three Human Phosphoproteomes.

Brett W. Engelmann , Chiaowen Joyce Hsiao , John D. Blischak , Yannick Fourne
Scientific Reports 8 ( 1) 12106

1
2018
WASP: allele-specific software for robust discovery of molecular quantitative trait loci

Bryce van de Geijn , Graham McVicker , Yoav Gilad , Jonathan Pritchard
bioRxiv 011221

11
2014
1
2014
Genetic Variation, Not Cell Type of Origin, Underlies Regulatory Differences in iPSCs

Courtney L Kagan , Nicholas E Banovich , Bryan J Pavlovic , Kristen Patterson
bioRxiv 013888

1
2015
Impact of RNA degradation on measurements of gene expression

Irene Gallego Romero , Athma A. Pai , Jenny Tung , Yoav Gilad
bioRxiv 002261

3
2014
Systematic Comparison of High-throughput Single-Cell and Single-Nucleus Transcriptomes during Cardiomyocyte Differentiation.

Alan Selewa , Ryan Dohn , Heather Eckart , Stephanie Lozano
Scientific Reports 10 ( 1) 1535 -1535

67
2020
The Effect of Freeze-Thaw Cycles on Gene Expression Levels in Lymphoblastoid Cell Lines

Minal Çalışkan , Jonathan K. Pritchard , Carole Ober , Yoav Gilad
PLoS ONE 9 ( 9) e107166

38
2014
Correction: Loss of Olfactory Receptor Genes Coincides with the Acquisition of Full Trichromatic Vision in Primates

Yoav Gilad , Victor Wiebe , Molly Przeworski , Doron Lancet
PLoS Biology 5 ( 6) e148

2007