Models of Selection, Isolation, and Gene Flow in Speciation

作者: Michael W. Hart

DOI: 10.1086/BBLV227N2P133

关键词: Genetic algorithmBiologyGene flowSelection (genetic algorithm)Ecological speciationPopulationGenetic analysisEvolutionary biologyGeneticsReproductive isolationDemographic history

摘要: Many marine ecologists aspire to use genetic data understand how selection and demographic history shape the evolution of diverging populations as they become reproductively isolated species. I propose combining two types analysis focused on this key early stage speciation process identify selective agents directly responsible for population divergence. Isolation-with-migration (IM) models can be used characterize reproductive isolation between (low gene flow), while codon differences at molecular level (especially positive high rates amino acid substitution). Accessible transcriptome sequencing methods generate large quantities needed both analysis. highlight recent examples (including our work fertilization genes in sea stars) which confluence interest, models, has led taxonomically broad advances understanding spec...

参考文章(93)
Patrik Nosil, Jeffrey L. Feder, GENOME EVOLUTION AND SPECIATION: TOWARD QUANTITATIVE DESCRIPTIONS OF PATTERN AND PROCESS Evolution. ,vol. 67, pp. 2461- 2467 ,(2013) , 10.1111/EVO.12191
Erica L. Larson, Jose A. Andrés, Steven M. Bogdanowicz, Richard G. Harrison, Differential introgression in a mosaic hybrid zone reveals candidate barrier genes. Evolution. ,vol. 67, pp. 3653- 3661 ,(2013) , 10.1111/EVO.12205
R. R. Hudson, Gene genealogies and the coalescent process. Oxford Surveys in Evolutionary Biology. ,vol. 7, pp. 1- 44 ,(1990)
PATRIK NOSIL, Speciation with gene flow could be common. Molecular Ecology. ,vol. 17, pp. 2103- 2106 ,(2008) , 10.1111/J.1365-294X.2008.03715.X
Graham Muir, Christopher J. Dixon, Andrea L. Harper, Dmitry A. Filatov, DYNAMICS OF DRIFT, GENE FLOW, AND SELECTION DURING SPECIATION IN SILENE Evolution. ,vol. 66, pp. 1447- 1458 ,(2012) , 10.1111/J.1558-5646.2011.01529.X
Noritaka Hirohashi, Noriko Kamei, Hideo Kubo, Hitoshi Sawada, Midori Matsumoto, Motonori Hoshi, Egg and sperm recognition systems during fertilization Development Growth & Differentiation. ,vol. 50, ,(2008) , 10.1111/J.1440-169X.2008.01017.X
Michael W. Hart, Iva Popovic, Richard B. Emlet, Low rates of bindin codon evolution in lecithotrophic Heliocidaris sea urchins. Evolution. ,vol. 66, pp. 1709- 1721 ,(2012) , 10.1111/J.1558-5646.2012.01606.X
Nick Goldman, Ziheng Yang, A codon-based model of nucleotide substitution for protein-coding DNA sequences. Molecular Biology and Evolution. ,vol. 11, pp. 725- 736 ,(1994) , 10.1093/OXFORDJOURNALS.MOLBEV.A040153
Ole Seehausen, Roger K Butlin, Irene Keller, Catherine E Wagner, Janette W Boughman, Paul A Hohenlohe, Catherine L Peichel, Glenn-Peter Saetre, Claudia Bank, Åke Brännström, Alan Brelsford, Chris S Clarkson, Fabrice Eroukhmanoff, Jeffrey L Feder, Martin C Fischer, Andrew D Foote, Paolo Franchini, Chris D Jiggins, Felicity C Jones, Anna K Lindholm, Kay Lucek, Martine E Maan, David A Marques, Simon H Martin, Blake Matthews, Joana I Meier, Markus Möst, Michael W Nachman, Etsuko Nonaka, Diana J Rennison, Julia Schwarzer, Eric T Watson, Anja M Westram, Alex Widmer, None, Genomics and the origin of species Nature Reviews Genetics. ,vol. 15, pp. 176- 192 ,(2014) , 10.1038/NRG3644