Analysis of the mitochondrial D-Loop reveals that neither river boundaries nor geographic distance structure the fine-scale genetic variation of an Amazonian treefrog

作者: Jonatha Edson de Paula Lima , Vladimir Pavan Margarido , Rafaela Maria Moresco , Domingos de Jesus Rodrigues

DOI: 10.1007/S10750-019-04069-0

关键词: Resistance (ecology)Genetic variationBiologyBiological dispersalGeographical distanceAnalysis of molecular varianceAmazonianGenetic diversityFluvialEcology

摘要: While most anurans have limited vagility and local fidelity, there are some exceptions. In the present study, we used Boana boans, a large treefrog found throughout of Amazon basin, as model organism. We investigated possible isolation B. boans demes located on opposite margins Juruena River their population structure. sampled 14 individuals analyzed mitochondrial D-Loop to verify whether river or Euclidean distance is acting barrier dispersal this frog. The sequencing revealed 12 haplotypes, with global Fst values − 0.079, K2P ranging from − 0.187 0.054, primarily intrapopulation (81.78%) genetic diversity, only 18.22% variation being among populations. Analysis molecular variance Bayesian cluster analysis detected lack structuring within study area. species presented capacity for over long distances in comparison other amphibians, which, together its resistance desiccation reproductive mode, enable disperse across rivers overland. specific case River, many fluvial islands area may also be favorable species.

参考文章(65)
Tuliana O Brunes, Maria Tereza C Thomé, João Alexandrino, Célio FB Haddad, Fernando Sequeira, None, Ancient divergence and recent population expansion in a leaf frog endemic to the southern Brazilian Atlantic forest Organisms Diversity & Evolution. ,vol. 15, pp. 695- 710 ,(2015) , 10.1007/S13127-015-0228-4
Lisette P. Waits, Samuel A. Cushman, Steve F. Spear, Applications of landscape genetics to connectivity research in terrestrial animals [Chapter 12] In: Balkenhol, Niko; Cushman, Samuel A.; Storfer, Andrew T.; Waits, Lisette P., eds. Landscape Genetics: Concepts, Methods, Applications, First Edition. John Wiley and Sons Ltd. p. 199-219.. pp. 199- 219 ,(2015) , 10.1002/9781118525258.CH12
I. A. Arif, H. A. Khan, Molecular markers for biodiversity analysis of wildlife animals: a brief review Animal Biodiversity and Conservation. ,vol. 32, pp. 9- 17 ,(2009)
CÉLINE BORN, OLIVIER J. HARDY, MARIE-HÉLÈNE CHEVALLIER, SIMON OSSARI, CHRISTIANE ATTÉKÉ, E. JEAN WICKINGS, MARTINE HOSSAERT-MCKEY, Small-scale spatial genetic structure in the Central African rainforest tree species Aucoumea klaineana: a stepwise approach to infer the impact of limited gene dispersal, population history and habitat fragmentation. Molecular Ecology. ,vol. 17, pp. 2041- 2050 ,(2008) , 10.1111/J.1365-294X.2007.03685.X
ANDREW STORFER, MELANIE A. MURPHY, STEPHEN F. SPEAR, ROLF HOLDEREGGER, LISETTE P. WAITS, Landscape genetics: where are we now? Molecular Ecology. ,vol. 19, pp. 3496- 3514 ,(2010) , 10.1111/J.1365-294X.2010.04691.X
Igor L. Kaefer, Bruno M. Tsuji-Nishikido, Edvaldo P. Mota, Izeni P. Farias, Albertina P. Lima, The Early Stages of Speciation in Amazonian Forest Frogs: Phenotypic Conservatism Despite Strong Genetic Structure Evolutionary Biology-new York. ,vol. 40, pp. 228- 245 ,(2013) , 10.1007/S11692-012-9205-4
Václav Gvoždík, Jiří Moravec, Cornelya Klütsch, Petr Kotlík, Phylogeography of the Middle Eastern tree frogs (Hyla, Hylidae, Amphibia) as inferred from nuclear and mitochondrial DNA variation, with a description of a new species. Molecular Phylogenetics and Evolution. ,vol. 55, pp. 1146- 1166 ,(2010) , 10.1016/J.YMPEV.2010.03.015
LAURENT EXCOFFIER, HEIDI E. L. LISCHER, Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows Molecular Ecology Resources. ,vol. 10, pp. 564- 567 ,(2010) , 10.1111/J.1755-0998.2010.02847.X